Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi149g00111 ATGGGATTGGCTTCTGTTGTTCACAACGGCGTCCAAATTCCATTCAACTTCGATCACAGCCCTCTCAGGGTTTCACACTCACCTCCAATTTCAAAATTCTCTGCATTCCACTCTGTTCACCATCCTATCTCTGCCTTTTGCTCAGTGTATCCTCATCGTGTTCCACTTCTATGCTCCAGACGAATTAGCCAGAATAATGGATTACCTTCCTCAGAAGCAAAGAGGATTAGTGCTCAACCAAAGGATGACATTAGCAATGTTGAGAGATCTCGTACTCAGGAATCACAGGGAAATGAAACTTACAACTCCTCTGTTAGAACTGTAGCCTTATGGGTGTGCACTGCAGTGGCATTTGGTGTCGGTTTGGGTTTTATAGAAGGTTTTGGCAAGGCATCCGAATTCTTTGCTGGGTACATATTGGAGCAAAGTCTTTCAGTAGATAACCTCTTTGTCTTTGTTCTAATATTCAAATACTTCAAAGTACCATTTTCATACCAGAATCGTGTACTTTCCTATGGTATTGCTGGTGCAGTTGTCTTTCGCCTGACATTAATACTTCTTGGAACAGCCACCCTTCAGAGGTTTGAGGAAGTCAACCTTCTCTTTGCCGCAATATTACTCTTCTCATCATTTAAGCTATTTGCTAGTGAAGAAGACGAGTCTGACTTATCTGATAACTTTGTGGTGAAGACATGCCAGAAATTGATCCCTGTAACAACCTATTATGATGGAAACCGGTTCATAACAAATCAGGATGGGGTGTGGAAAGCCACCCCTTTGCTCCTTACTGTAGCAGTTATTGAACTCAGTGACATTGCATTTGCAGTTGACTCAATACCTGCAGTTTTTGGTGTAACACGGGATCCATTTGTAGTGTTTACATCTAATCTTTTTGCGATCTTGGGTTTAAGGTCACTTTACATGATAATTTCCGAGGGTATGTCAGAATTGAAGTACTTACAGCCGTCCATTGCTGTTGTTCTGGGATTTATTGGGTGTAAGATGGTCCTGGATTATTTTGGTGGGTTTTGTGTTGTCAAAATCCTTTATGCATTGAAAATGGAAGTTCGTCCTCCCCCGTTAACTTCCACTTCCGACCCACCTCCTCTCTTTGATGGAACTACCAGGTTGTTCATCAATTACGCTTGCCCTTATGCACAACGTGTATGGATCACAAGGAACTACAAGGGGCTACAAGACAAGATCCAATTGGTTCCTATCGACCTTCAAAACAGGCCTGCTTGGTATAAGGAGAAACTCTACCCTGAAAATAAGCACAATGGCAAGGTATTGGGAGAAAGTCTTGATCTGATCAAATATGTAGATGCCAACATCGAAGGGACACCTCTGCTTCCAAGTGATCCTGCCAAGAAAGAGTTCGGTGAGCAACTGTTATCCCATGTTGATACATTCACCAGAGACCTGTTTGTTTCATTGAAAGGGGATGCTGTACAACAAGCCAGTCCTGCTTTTGAATACTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCATTCCTGCTTGGTCAATTCAGTTTGGTGGATATTGCTTATATTCCGTTTGTTGAAAGATTCCATATTGTATTTGCTGAGGTGTTCAAGCATGACATCACTGAAGGAAGGCCTAAACTTAAAGCATGGATTGAGGAGTTGAACAAGATTGGTGCTTATACAGAGACAAGAGTCGATCCTCAGGAAATAGTTGATCTTTTCAAGAAACGTTTTCTGCCTCAACAGTAA 1740 0.4195 MGLASVVHNGVQIPFNFDHSPLRVSHSPPISKFSAFHSVHHPISAFCSVYPHRVPLLCSRRISQNNGLPSSEAKRISAQPKDDISNVERSRTQESQGNETYNSSVRTVALWVCTAVAFGVGLGFIEGFGKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPFSYQNRVLSYGIAGAVVFRLTLILLGTATLQRFEEVNLLFAAILLFSSFKLFASEEDESDLSDNFVVKTCQKLIPVTTYYDGNRFITNQDGVWKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFVVFTSNLFAILGLRSLYMIISEGMSELKYLQPSIAVVLGFIGCKMVLDYFGGFCVVKILYALKMEVRPPPLTSTSDPPPLFDGTTRLFINYACPYAQRVWITRNYKGLQDKIQLVPIDLQNRPAWYKEKLYPENKHNGKVLGESLDLIKYVDANIEGTPLLPSDPAKKEFGEQLLSHVDTFTRDLFVSLKGDAVQQASPAFEYLENALGKFDDGPFLLGQFSLVDIAYIPFVERFHIVFAEVFKHDITEGRPKLKAWIEELNKIGAYTETRVDPQEIVDLFKKRFLPQQ 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi149g00111 579 Pfam Glutathione S-transferase, C-terminal domain 483 549 - -
Sebi149g00111 579 FunFam Glutathione S-transferase L2, chloroplastic 348 446 - -
Sebi149g00111 579 NCBIfam TerC/Alx family metal homeostasis membrane protein 99 350 IPR022369 GO:0016020
Sebi149g00111 579 Pfam Glutathione S-transferase, N-terminal domain 377 447 IPR004045 -
Sebi149g00111 579 FunFam Lambda class glutathione S-transferase 447 578 - -
Sebi149g00111 579 Pfam Integral membrane protein TerC family 135 338 IPR005496 GO:0016020
Sebi149g00111 579 SUPERFAMILY GST C-terminal domain-like 446 575 IPR036282 -
Sebi149g00111 579 Gene3D Glutaredoxin 350 446 - -
Sebi149g00111 579 PANTHER MEMBRANE BOUND PREDICTED REDOX MODULATOR 8 341 - -
Sebi149g00111 579 CDD GST_C_Lambda 454 572 - -
Sebi149g00111 579 MobiDBLite consensus disorder prediction 66 98 - -
Sebi149g00111 579 SUPERFAMILY Thioredoxin-like 367 449 IPR036249 -
Sebi149g00111 579 Gene3D - 447 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi149g00111 Sebi-Chr149 1654099 1668956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi149g00111 354 576 Glutathione S-transferase Gene Family AT5G02790 65.351 9.19e-109 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi149g00111 - - gmx:100804852 532.717