Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi149g00109 ATGGTTAGATCATGCTGGAAACCAGCTACAGATGGTGATGAAGGAGATGGGAGTGGAAGAGTTGATGGACTCTTATGGTACAAAGATTTGGGGAACCATCTTTATGGGGAATTCTCAATGGCTGTAGTTCAGGCCAATAATTTATTGGAAGATAGAAGTGAACTTGAGTCTGGACCTTTGAGTTCCAACCATTTGGGTCCTCAAGGAACCTTTATAGGTGTATATGATGGCCATGGTGGAACTGAGGCCTCTCAGTTTGTCAGTGACAATCTTTTCTGCAATCTCAAAAGGATTGCAGGTGAAAATGAAGGCATGTCAGAAAGTGTCATAAAAAGGGCATTTTCAGCAACAGAGGAGGGTTTTCTATCTCTTGTGAGGAAGCAGTGGCTAAGCAAGCCACAGATTGCATCCATGGGTACTTGCTGTTTGGTGGGGATAATTTGCAATGGCATGCTATATATTGCAAATTCTGGAGACTCCCGGGTGGTGTTAGGAAGAGTAGAGAGGGCACTAGGGGAAGCATCAGCTATACAATTATCTACAGAACACAATGTTAACCAAGAAACAGTTAGAGATGAACTTCGCTCAAAGCATCCCTATGATTCACACATAGTGGTTATGAGACACAACGTTTGGCGTGTCAAAGGCCTCATACAGGTTTCACGCTCCATAGGTGATGCATATTTGAAGAAAGCAGAGTTTAATAGGGAACCTCTACCATTGAAGTATAGACTACCTGAAACATTCTTCAAGCCAATTCTTAGTTGTGAGCCATCAATATCATTGCACAAACTCCACCCTGATGATCAATTTCTCATATTTGCTTCTGATGGTTTATGGGAGCATCTTAGCAATCAAGAGGCTGTTAACATAGTCAGCAATAACCCACCTAACGGAATTGCTAGGCGACTTGTGAAAGCTGCACTTAGAGAAGCAGCTAAGAAGAGTGAAATTAGACTTGCAGACCTCCAAAAGATTGAACAAGGGACAAGGAGAAACTTCCATGATGATATAACAGTTATTGTTGTATTTCTAAATCCCAAAATGATTGATAATGCCTCTCTCTGCGGTTCTCCTCTTTCAATCAAAGGAGGCGAGTCAGCCAATTACTAG 1113 0.4196 MVRSCWKPATDGDEGDGSGRVDGLLWYKDLGNHLYGEFSMAVVQANNLLEDRSELESGPLSSNHLGPQGTFIGVYDGHGGTEASQFVSDNLFCNLKRIAGENEGMSESVIKRAFSATEEGFLSLVRKQWLSKPQIASMGTCCLVGIICNGMLYIANSGDSRVVLGRVERALGEASAIQLSTEHNVNQETVRDELRSKHPYDSHIVVMRHNVWRVKGLIQVSRSIGDAYLKKAEFNREPLPLKYRLPETFFKPILSCEPSISLHKLHPDDQFLIFASDGLWEHLSNQEAVNIVSNNPPNGIARRLVKAALREAAKKSEIRLADLQKIEQGTRRNFHDDITVIVVFLNPKMIDNASLCGSPLSIKGGESANY 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi149g00109 370 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Sebi149g00109 370 FunFam Phosphatase 2C family protein 26 355 - -
Sebi149g00109 370 Coils Coil 306 326 - -
Sebi149g00109 370 Gene3D - 28 354 IPR036457 -
Sebi149g00109 370 SUPERFAMILY PP2C-like 63 346 IPR036457 -
Sebi149g00109 370 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
Sebi149g00109 370 Pfam Protein phosphatase 2C 60 314 IPR001932 -
Sebi149g00109 370 PANTHER PROTEIN PHOSPHATASE 28 343 IPR015655 GO:0004722|GO:0006470
Sebi149g00109 370 CDD PP2Cc 62 345 IPR001932 -
Sebi149g00109 370 SMART PP2C_4 31 343 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi149g00109 Sebi-Chr149 1631440 1633707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi149g00109 1 365 PP2C-type Phosphatase Gene Family AT3G12620 66.576 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi149g00109 K01102 - gmx:100814123 659.448