Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi149g00098 ATGGGGAAGGGAAGTCAGAATTGCGAGAAACCAGAAAACTCACATTCAGAACGAGAAATCTTCAAGGCGTGGTCTAGGAGTGTGAACGAATGCGAGGAGCATTTCAAGGTGAGTCTGAAGACGGGGTTGAGTTCTCACGAAGTGGAGAATCGGCGCCATATCTATGGTTCGAACGAGTTAGAGAAGCACGAGAACCAATCCATTTGGAGCCTTGTTCTCGATCAGTTCAACGACACTTTGGTTCGGATCCTCCTCGTCGCCGCCATCGTTTCCTTCGTCCTCGCCTGGCTCGACGGCGATGAAGGTGGCGACATGGAAATAACCGCCTTCGTGGAGCCTCTCGTGATATTCCTCATCCTGATCGTCAACGCCATCGTCGGCGTTTGGCAGGAGAGCAATGCCGAGAAGGCACTAGAAGCGCTGAAGGAGATTCAGTCGGAGCACGCCGCCGTCGTCCGCGGAGGAAAGTTGATCCCAAATTTGCCGGCGAAGGATCTCATTCCCGGCGATGTGGTGGAGCTTAAGGTCGGAGATAAGGTCCCTGCTGATATGCGTGTTGCGGAGTTGGTTAGTTCTACTCTGCGGTTGGAACAGGGCTCTCTCACTGGAGAGAGTGAAGCGGTAATTAAGACCTACAAGGCTGTTGATGAAGACGCCGATATTCTAGGCAAGAAGTGTATGCTTTTCGCAGGGACCACTGTTGTTAACGGACATTGCCTCTGTTTCGTTACTCACACTGGAATGGAAACAGAGATTGGTAAAGTGCATAAGCAGATACACGTGGCGGCGCTGAATGAGGAAGAAACACCGTTGAAGAAGAAGCTCAATGAGTTTGGAGAGATGTTAACACTGATAATTGGAGTTGTGTGTGCTTTGGTGTGGCTCATCAATGTGAAGTATTTTCTCACCTGGGAATACGAGGGTGGGTGGCCGAGGAACTTCAAGTTCTCGTTTGAGAAGTGCACATATTACTTTGAGATTGCTGTGGCATTGGCCGTGGCTGCTATTCCTGAAGGTTTGCCTGCGGTTATCACTGCTTGCTTGGCGCTAGGTACTCGCAAGATGGCTCAGAAGAATGCGCTTGTTCGGAAACTAACGAGTGTGGAAACGCTGGGTTGTACCACTGTGATTTGTTCGGATAAAACAGGGACGTTGACGACGAATCAGATGGCGGTGACGAAAATTGTGGCTGTTGGTGATAATGCAGATGCTCTGCAATTCTTTAAGGTGGAAGGGACTACTTACAATCCATCAGATGGTAAAATAGAGGACTGGTCAACGGGTCCATTGGATGCTAATCTTGAGATGATAGCCAAAATATGTGCAGTTTGTAATGATGCAGGGGTTACAGAGTCAGAGCAAAAGTTTGTGGCCCATGGAATTCCTACTGAAGCAGCCTTAAAGGTTCTGGTGGAGAAGATGGGCCTTCCTGAAGGAAAGGATGCATTTTCAGCAAATGGAAGAACCTTATTACGTTGTTGTGAATGGTGGAATGAACATGACCCTCGGATTGCTACTCTTGAGTTTGACCATGATAGGAAGTCAATGGGTGTTATTGTGGACTCTGGTCCAGGGAAAAGATCACTGCTGGGTGCTGTAGAAAATGTGTTGGAACGAAGCTCTAAAATTCAGTTGTATGACGGTTCTATTGTGAAGCTGGACAATAATGGTAGGAACCGTGTTTTGCAAGCTCTTCATGAAATGTCAACTGGTGCATTACGCTGTTTGGGATTTGCCTACAAGGATGAGCTCCCAATGTTTGAAAGCTATCGTGGTAATGATGATCATCCAGCACACCAGCTTTTGCTTAATCCTTCAAACTATTCATCAATCGAAAGTGAACTTATTTTTGTTGGTTTTGTTGGATTAAGGGATCCTCCTAGGGAAGAGGTATACCAAGCAATTGAGGACTGCAGAGCAGCTGGAATTCGTGTTTTGGTTATTACTGGAGACAACAAGGACACAGCAGAAGCTATATGCCGTGAAATAGGTGTATTTCGACCCAATGAAGACATTAGTTTGAGAAGCATAACAGGAAAAGAGTTTATGGAACTGCGTGATAAAAAAGCCCATCTGGCTCAAAATGGTGGGCTTTTGTTTTCAAGGGCTGAACCTAGGCACAAACAAGAAATTGTGCGGCTGCTCAAAGAGGATGGAGAGGTGGTGGCCATGACTGGTGATGGTGTTAATGATGCACCTGCCTTGAAGCTTGCTGATATTGGCATTGCAATGGGCATTACTGGGACTGAGGTGGCAAAGGAAGCTTCGGATATGGTCTTGGCTGATGATAATTTTAGTACAATTGTTGCTGCTGTTGGTGAAGGTAGATCTATCTACAATAACATGAAGGCTTTTATCAGGTATATGATCTCTTCCAATATTGGCGAGGTCGCTTCTATATTTCTAACGGCAGCCCTAGGTATTCCTGAAGGATTGCTACCTGTTCAGCTTCTTTGGGTCAATCTTGTTACAGATGGACCACCCGCAACAGCTTTGGGATTTAATCCTCCAGATAAGGATATAATGAAGAAGCCTCCTCGTCGCAGTGATGACTCACTAATTAACTTGTGGATTTTATTCCGCTATCTGGTAATTTGCCCTGTTTTCTCTTTCCTTGCTCTAGCACCTGTTCCTGTGATTTGGGTGTTTGTTGGAAAAATTGGTAATATATCTGGATTACTTATTTCCACTTCATGTTGTTACTTTGCACAGGTTATTGGGATGTATGTTGGATTGGCTACAGTTGGTGTCTTTATAATATGGTATACCCATGGTTCCTTCTTGGGTATTAACCTTAGCGGGGATGGCCATACTCTTGTCACTTACTCCCAACTTAGCAACTGGGGTCAATGCTCCACATGGAATAATTTCACTGCTTCTCCCTTCACCGCTGGTGCTAGAGTTTTTTCTTTTGATAATGACCCCTGTGAATATTTCCAGGCTGGAAAGGTGAAAGCTATGACTCTCTCCCTCTCTGTGTTGGTAGCCATAGAAATGTTCAATTCTCTCAATGCCCTTTCTGAGGATGGAAGCCTTTTGACAATGCCTCCTTGGGTCAACCCTTGGCTTCTTTTGGCAATGTCCGTGTCATTTGGTCTTCACTTTTTGATCTTGTATGTGCCATTCTTAGCCCAAGTATTTGGCATTGTGCCCCTCAGCTTCAATGAATGGCTTTTGGTTTTGGTTGTTGCATTCCCTGTTGTTATAATTGACGAGATTCTGAAACTTGTGGGGAGGTGTACAAGTACAAGTAGGTCTCAAACATCTCCGACAAGAGCAAAGCAAAAATCAGAGTAG 3297 0.4553 MGKGSQNCEKPENSHSEREIFKAWSRSVNECEEHFKVSLKTGLSSHEVENRRHIYGSNELEKHENQSIWSLVLDQFNDTLVRILLVAAIVSFVLAWLDGDEGGDMEITAFVEPLVIFLILIVNAIVGVWQESNAEKALEALKEIQSEHAAVVRGGKLIPNLPAKDLIPGDVVELKVGDKVPADMRVAELVSSTLRLEQGSLTGESEAVIKTYKAVDEDADILGKKCMLFAGTTVVNGHCLCFVTHTGMETEIGKVHKQIHVAALNEEETPLKKKLNEFGEMLTLIIGVVCALVWLINVKYFLTWEYEGGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITACLALGTRKMAQKNALVRKLTSVETLGCTTVICSDKTGTLTTNQMAVTKIVAVGDNADALQFFKVEGTTYNPSDGKIEDWSTGPLDANLEMIAKICAVCNDAGVTESEQKFVAHGIPTEAALKVLVEKMGLPEGKDAFSANGRTLLRCCEWWNEHDPRIATLEFDHDRKSMGVIVDSGPGKRSLLGAVENVLERSSKIQLYDGSIVKLDNNGRNRVLQALHEMSTGALRCLGFAYKDELPMFESYRGNDDHPAHQLLLNPSNYSSIESELIFVGFVGLRDPPREEVYQAIEDCRAAGIRVLVITGDNKDTAEAICREIGVFRPNEDISLRSITGKEFMELRDKKAHLAQNGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGLLPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLINLWILFRYLVICPVFSFLALAPVPVIWVFVGKIGNISGLLISTSCCYFAQVIGMYVGLATVGVFIIWYTHGSFLGINLSGDGHTLVTYSQLSNWGQCSTWNNFTASPFTAGARVFSFDNDPCEYFQAGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSFNEWLLVLVVAFPVVIIDEILKLVGRCTSTSRSQTSPTRAKQKSE 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi149g00098 1098 SUPERFAMILY Calcium ATPase, transmembrane domain M 896 1080 IPR023298 -
Sebi149g00098 1098 Pfam Cation transporter/ATPase, N-terminus 24 91 IPR004014 -
Sebi149g00098 1098 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 887 1083 - -
Sebi149g00098 1098 PANTHER CALCIUM-TRANSPORTING ATPASE 24 869 - -
Sebi149g00098 1098 FunFam Calcium-transporting P-type ATPase, putative 621 770 - -
Sebi149g00098 1098 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 729 886 - -
Sebi149g00098 1098 Pfam haloacid dehalogenase-like hydrolase 375 739 - -
Sebi149g00098 1098 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 388 626 - -
Sebi149g00098 1098 SUPERFAMILY HAD-like 376 829 IPR036412 -
Sebi149g00098 1098 SUPERFAMILY Calcium ATPase, transduction domain A 148 258 IPR008250 -
Sebi149g00098 1098 Gene3D - 897 1081 - -
Sebi149g00098 1098 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 385 623 IPR023299 GO:0000166
Sebi149g00098 1098 SFLD Haloacid Dehalogenase 359 777 - -
Sebi149g00098 1098 Gene3D - 375 770 IPR023214 -
Sebi149g00098 1098 SFLD p-type atpase 359 777 IPR044492 -
Sebi149g00098 1098 Gene3D - 41 262 - -
Sebi149g00098 1098 Pfam Cation transporting ATPase, C-terminus 810 1077 IPR006068 -
Sebi149g00098 1098 Gene3D - 74 884 - -
Sebi149g00098 1098 PRINTS P-type cation-transporting ATPase superfamily signature 378 392 - -
Sebi149g00098 1098 PRINTS P-type cation-transporting ATPase superfamily signature 641 651 - -
Sebi149g00098 1098 PRINTS P-type cation-transporting ATPase superfamily signature 749 761 - -
Sebi149g00098 1098 PRINTS P-type cation-transporting ATPase superfamily signature 725 744 - -
Sebi149g00098 1098 PRINTS P-type cation-transporting ATPase superfamily signature 197 211 - -
Sebi149g00098 1098 PRINTS P-type cation-transporting ATPase superfamily signature 619 630 - -
Sebi149g00098 1098 Gene3D - 388 626 IPR023299 GO:0000166
Sebi149g00098 1098 SUPERFAMILY Calcium ATPase, transmembrane domain M 22 885 IPR023298 -
Sebi149g00098 1098 SMART Cation_ATPase_N_a_2 22 96 IPR004014 -
Sebi149g00098 1098 FunFam Calcium-transporting ATPase, putative 124 260 - -
Sebi149g00098 1098 ProSitePatterns E1-E2 ATPases phosphorylation site. 380 386 IPR018303 -
Sebi149g00098 1098 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 249 398 - -
Sebi149g00098 1098 Pfam E1-E2 ATPase 144 358 - -
Sebi149g00098 1098 NCBIfam HAD-IC family P-type ATPase 317 400 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi149g00098 1098 NCBIfam HAD-IC family P-type ATPase 699 806 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi149g00098 Sebi-Chr149 1443649 1448833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi149g00098 1 1098 Primary Pumps ATPases(2) AT1G07670 73.799 0.0 1652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi149g00098 K01537 - gmx:100812151 1763.43