Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi149g00080 | ATGGACAAATCCCGCAACACCAAGTCCAACGTTGCAGCTCCCAACCAATCCCAACCAGCTCTTCATCAAGGAAACAAGAAGGCTCATAGACAGCGACAACCTCCAGATTTGTCTCCTGATTCTAGTTCTTGCGGTGGTGGGGTTGCAGACAAAGATTCGTTCTCATTTAAATTTGGGTGGAGATCTTCTAAACAACCTTTTGGAACTCCAATTAAGAAGTTGTTAACTGAAGAGATGTCATCAAACACTGAATCTAAAAGAAGATCACCAGGTGTTATTGCCAGATTGATGGGTCTTGATGGGCTGCCATTTCAGCAGCCTGCTAATAAGCAGCACAAGGGTTTGTCAGAAAACCATCTACAGGGGACAACACAATTAGAGAAAACTCGAAACAGAGGAACAACGAATGATGGCCGATCCTCTAGGAAGAGCTCCAAGGATCAGCAAGAATTTAAGGATGTATTTGAGGTCTCTGAGATCCCAAAGGTAGAGAGTAATAGGTATTCATCGCATGGGTGTGCAGACTTGAAGATCACCGATGCTGAGATTTCATTCATTGAACAGAAGTTCATGGATGCCAAACGCCTTGCAACTTATCAGGATTTACAGTCTTCAAAGGATTTCCGTGATACACTTGAGGTTTTGGACTCTAACAAGGATCTTCTGCTAAAATACTTTAAGCGACCAGATTCTTTGTTTAAAAAGCATTTGAGTGATCTGCAAGCTTCTCCTCTCCAATCACATTTTGGTAATGTTGAAGCTACAAATATTGAGAAGTATGAACATGACTACAGTTGGAGGCCTGATAGGGAGACAACACGGTCGAATTACAATAGATTTTCTCAGAAACAACAAGATGGTTATCCTTGCCAATTTGACAAAATACATGTGATGCATAGTTCACCAAAATCATCAAAGCTTCAGTTTAAGGGTAGCCATGAACAAGATGCAGTCCCCACAAAGATTGTTGTCCTAAAACCTAATCTTGGAAAATTGCAGAATGGTACGAGGATTGCATCATCACCTTGTTCTTCGCATAATTTTCTGTCAGAGCATGGAAATCACACTGAACTTTCGAATGCCAGATTTAGAGACACTGAACTGTATCAAATGACAAATTTGCCTGACAGTGCCAGGTCTTTTAGGCACAATTCATTGGAATCTAGAGAAATTGCAAAGGAAATCACTAGGCAAATGAAAAATAGTCTGAGCAATGGTTGCACAATGTTTTCGTCTTCTAGATTTAGAGGATATACTGGGGATGGTAGTTCATATAGTGTTTCTGGGAATGAATCTCCAGAGGAAACAACATCAACTTTGGGAAACTCATTGGACTTAAATAACCGTAGCAGGCGGTCATCCCATTCTAGTGAATCATCTGTGAGTACAGAGGCAAAAAAGAGATTATCAGAGAGGTGGAAAATGGCACACAAGTCTCAAGAGGTGCAAGTCATCAGCAGGAGCAGCACGCTGGCTGAAATGCTTGCCATCCCTGATAACGAAATGAAGGCTGCAAATTTTGACAGCATGGCTAGTGGGGAAGGTTTAGATGATAAATTTGCTCGCAATGGTGAACCTTCTGGGTGGGCAGAACCATTGGGGATCAGCAGTAGGGATGGTTGGAAGGATGGATATATTGGAAGTTTGCCCAGGTCAAAATCTCTTCCCAGTTCATCTATTGCCTTTGGAAGTCCTAGAACATTCTTGCACACTGAAGCACTTCGTGATGATAGATTCATGGTGCGAAAGGAAGCCCTTAAACGGGAGCGGAAAAGAGATACAAAGAATCTTGATCATAGACATAGCGTGAATACTAGAAACACAAAATCTGGTCACAAGAAGTCTCGGTCTTTGCATTCATCGAAGCTGGAAGGTAGTGAGTTTTCTCCAGACTTAAATACAATTCAGAATAAAATGAAGATCAAACTTGAAGATTCACCCAAGCTAAAGGTTCTGGCCACTGGACCCTTTGCCGAGACCCTCAAAGATAAAATTGCAGTTAATGATGATGCTATGGATGTGGCAAATGAAAACACAAATGGGTCTGCTGAACCTTCTTCTGATAAGGTGCTTTGTGAATTATCTTCTCGTGTCATGATAAAAGGTGACAGTGGTGTTGTTGACAAAGACAATTCAACACAGCAGGACCTATCGGCTGAGTCTTCTGGTGGAAGTTCAGTCTTCTCTGAACCACCTGTACCTAGACTTGAATCTTCATGCTGTAAAGATGGTGATCAACCCAGTCCAGTCTCAGTCCTTGAACCTTCATATACTGATGATCTGTCATCTTGTTCTGAATGTTTTGAAAGTCTCAGTGCTGACCTACAAGGGCTGCGAATGCAACTCCAGTTGCTGAAGTTGGGATCTGAAGGAGATGTGGAAGGATCCATGCTAATTTCAAGCGATGAAGATGGTGGGGAAGTATCTACTGGAGTGTTAGAAGAAAATGGATTATGCAGAAATGAAGATAGCTGGGAGTCTTCATACATTATTGATGTCTTGTCTGAGTCTGGCATCAATGGGGCTGGTCTCGATACAATTATGGAAGCTTGGCATTCTCTAGAATGCCCTGTGAGTCTTTCAGTGTTTGATGAACTTGAAAAGAGGTACTGTGATTGGACTACTTGTTCAAGGTCTGAAAGGAGATTGCTTTTTGACCGTATAAATTCAGGAATTGTCAAGATGCACCAGCAATCCACATATGCACAACCATGGGTGGCCTCTGCAACAAAAAAATTTGGTTCTATCTTGACCCAGAATGGGCTTCAAGATGATCTTTATAGGATGCTAGGGAGCCAAGGAAAAGTAGAGGATGATGCTCTGGGGATGGTCCTGGTTGGGGAGTCGCAGTGGTTGGACTTGAAAGATGACATTGATGTAATAGGCAGAGAAGTCGAGAGATTGTTATTAGATGATATAGTGGCAGAGATAGCAGGTGCCTAG | 2943 | 0.4217 | MDKSRNTKSNVAAPNQSQPALHQGNKKAHRQRQPPDLSPDSSSCGGGVADKDSFSFKFGWRSSKQPFGTPIKKLLTEEMSSNTESKRRSPGVIARLMGLDGLPFQQPANKQHKGLSENHLQGTTQLEKTRNRGTTNDGRSSRKSSKDQQEFKDVFEVSEIPKVESNRYSSHGCADLKITDAEISFIEQKFMDAKRLATYQDLQSSKDFRDTLEVLDSNKDLLLKYFKRPDSLFKKHLSDLQASPLQSHFGNVEATNIEKYEHDYSWRPDRETTRSNYNRFSQKQQDGYPCQFDKIHVMHSSPKSSKLQFKGSHEQDAVPTKIVVLKPNLGKLQNGTRIASSPCSSHNFLSEHGNHTELSNARFRDTELYQMTNLPDSARSFRHNSLESREIAKEITRQMKNSLSNGCTMFSSSRFRGYTGDGSSYSVSGNESPEETTSTLGNSLDLNNRSRRSSHSSESSVSTEAKKRLSERWKMAHKSQEVQVISRSSTLAEMLAIPDNEMKAANFDSMASGEGLDDKFARNGEPSGWAEPLGISSRDGWKDGYIGSLPRSKSLPSSSIAFGSPRTFLHTEALRDDRFMVRKEALKRERKRDTKNLDHRHSVNTRNTKSGHKKSRSLHSSKLEGSEFSPDLNTIQNKMKIKLEDSPKLKVLATGPFAETLKDKIAVNDDAMDVANENTNGSAEPSSDKVLCELSSRVMIKGDSGVVDKDNSTQQDLSAESSGGSSVFSEPPVPRLESSCCKDGDQPSPVSVLEPSYTDDLSSCSECFESLSADLQGLRMQLQLLKLGSEGDVEGSMLISSDEDGGEVSTGVLEENGLCRNEDSWESSYIIDVLSESGINGAGLDTIMEAWHSLECPVSLSVFDELEKRYCDWTTCSRSERRLLFDRINSGIVKMHQQSTYAQPWVASATKKFGSILTQNGLQDDLYRMLGSQGKVEDDALGMVLVGESQWLDLKDDIDVIGREVERLLLDDIVAEIAGA | 980 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi149g00080 | 980 | MobiDBLite | consensus disorder prediction | 587 | 605 | - | - | |
| Sebi149g00080 | 980 | MobiDBLite | consensus disorder prediction | 703 | 750 | - | - | |
| Sebi149g00080 | 980 | Pfam | DUF761-associated sequence motif | 84 | 103 | IPR032795 | - | |
| Sebi149g00080 | 980 | MobiDBLite | consensus disorder prediction | 421 | 460 | - | - | |
| Sebi149g00080 | 980 | MobiDBLite | consensus disorder prediction | 7 | 24 | - | - | |
| Sebi149g00080 | 980 | MobiDBLite | consensus disorder prediction | 132 | 151 | - | - | |
| Sebi149g00080 | 980 | Pfam | Domain of unknown function (DUF4378) | 827 | 976 | IPR025486 | - | |
| Sebi149g00080 | 980 | MobiDBLite | consensus disorder prediction | 421 | 474 | - | - | |
| Sebi149g00080 | 980 | MobiDBLite | consensus disorder prediction | 707 | 728 | - | - | |
| Sebi149g00080 | 980 | MobiDBLite | consensus disorder prediction | 587 | 631 | - | - | |
| Sebi149g00080 | 980 | MobiDBLite | consensus disorder prediction | 1 | 151 | - | - | |
| Sebi149g00080 | 980 | Pfam | Protein of unknown function (DUF3741) | 187 | 231 | IPR022212 | - | |
| Sebi149g00080 | 980 | PANTHER | AFADIN | 27 | 978 | - | - | |
| Sebi149g00080 | 980 | MobiDBLite | consensus disorder prediction | 109 | 131 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sebi149g00080 | Sebi-Chr149 | 1127947 | 1133556 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sebi149g00080 | 66 | 980 | TRM (TON1 Recruiting Motif) Superfamily | AT3G53540 | 38.907 | 8.48e-149 | 464 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sebi149g00080 | - | - | ccaj:109788117 | 1343.18 |