Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi149g00079 ATGAGATCAATTATAATTGAGATTCAACCAGGAATGGTTAATCTGGTGTTTCCTTACGAGTTTTACCATGCAAGGGAAGATGTGATAAGGAATAGGTTAGAACTTGTTGATCAGTTTGGTCATCAGTTTAGCATTCCTCTGAATTTTGGTTGGAAGATTGTGGTAATGTGGGAAGTTGTTTCACAGTTGAAGCGCTTTTATGGTTTTGATAAGACTATGTATCTTCATCTTAAATATGAGGGTGGTATAAGATTCAGCTTTGAGGTTAAGGATGAAGATGGTATTCCTCTGACCCCTGGCTTAGTTCATCGAAGTGGGACAAGTGGTGTTGGCAATCCTGACATAGTTAATGTCAATTCTGAGAATCCAACTGAGAATCCTATGGGTATCGAGAATCCAAGTGGTCCTCAGAATGCAGTTGTTGGTAGAAGGGTTATGACTCGTTGGAAACAAACTCTTCCTTTCAGTGTGTCTGTTGGTAGGAGGGTTATGAGTTTTCAAAATCAATCTGGACGTGTGACTGCTGTTGCTGGTAGGAGGGTTATGAGTTTTGAGAAAGTCATAACAAAGAGTCAATCAAAAGGTGGACAGACCCTGCCTATACCAAGGAAATTTGTTGAAGAATTTATTCGAAATAACTGGAGAAGGTTGATCCTACAAGTTGGAGGTGGTCAACGTTACTACTGTAAATTGTTGAGGCGAAAAGGAAGTGAAAAAGATTGCCACCTTGGCAAACCTTGGTACAAGTTAGTTTCTGATATGAGACTAAGAACAGGGGACAAAGTTGTTTTCAAGACAAATATGAATGGCTTAAACACACTCAACGTGACTATCATTCGGAGGGGGAATTAG 852 0.3979 MRSIIIEIQPGMVNLVFPYEFYHAREDVIRNRLELVDQFGHQFSIPLNFGWKIVVMWEVVSQLKRFYGFDKTMYLHLKYEGGIRFSFEVKDEDGIPLTPGLVHRSGTSGVGNPDIVNVNSENPTENPMGIENPSGPQNAVVGRRVMTRWKQTLPFSVSVGRRVMSFQNQSGRVTAVAGRRVMSFEKVITKSQSKGGQTLPIPRKFVEEFIRNNWRRLILQVGGGQRYYCKLLRRKGSEKDCHLGKPWYKLVSDMRLRTGDKVVFKTNMNGLNTLNVTIIRRGN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi149g00079 283 Gene3D - 167 282 IPR015300 -
Sebi149g00079 283 SMART B3_2 184 282 IPR003340 GO:0003677
Sebi149g00079 283 CDD B3_DNA 183 280 IPR003340 GO:0003677
Sebi149g00079 283 ProSiteProfiles B3 DNA-binding domain profile. 184 282 IPR003340 GO:0003677
Sebi149g00079 283 Pfam B3 DNA binding domain 184 281 IPR003340 GO:0003677
Sebi149g00079 283 SUPERFAMILY DNA-binding pseudobarrel domain 180 275 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi149g00079 Sebi-Chr149 1123189 1124278 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi149g00079 B3 8.9e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi149g00079 - K20190 lja:Lj0g3v0086279.1 120.168