Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi149g00070 ATGTCTTTCCACAATCAAGCATTTTGGATGGGAAAGAGTCCTGGGTATATGAATGATGGTGACATGTCATATGACAATTCTTCTAGAATTGAGTCCAAGCGTGCTCATCAGGGGTTCATGGATGGCCCTGAAGTGGATCTGTTTCCCAATAAGAAACAGGCAGTAGAGGCTCCAAACAATTTATCAGCAGGAATGCTCAACTCCAATATTTCTTCATGGGGAAATTCCTCAAGTTTTCACTCTTTAACTGGTCATTTTACTGAACAACTCTTTGACCCAAATGTTGCATCTATGAATTTTGAAGACACAAACATTTGCCCTCTTAGCATAGATAATAAGTTGGGTGTGGAAAGAAAGGATAATATGGATCCTTTTGACAGTGATTCCTCATTTGGTTTATCCATGTCAACTACATTAGGAGATCCTCAACTAGTTTTTAATCATGGTGGAATCAGAAAAGTCAAAGTTGATGAGGTGAAGGAGTCTGAAAACATCATGTCTGTTCATTCGAATAATCCCTATGATAGGGGAGTTAGTAACACTGTATCAAATCCTCATGCATACAAGGGTGGCAATAATTCCACATCGATGAGTCTATCCTACGATAAAGGGGATGCCAATGTAATACTGATGGATGATGCTTATGACAGGACGAATAACAGTTTAATATCAATGGGTCAATCATATAACAAGGGAGATGACAGCTTATCTATGCACCCGACATACAAAGAGATTTGTAATACAATATCAATGGATCAAGGAGTCAGTAATGTGGATAGTAATATGATATCTATTGCTCAAGCTTACAACAAGGCCCATGACAGTTCTATGTCAAGTAACCACTTATTCAATGAGGTTGATGATAGCACCATACCAATGGGTCACACCTACCACCAGAGGGGAAATGACATGCCATTTATTTCTCATCCTTATAATAAAGGAGAGAGCACTATCATATCCTTTGGTGGCTGTGATTATGATGATACAACTTCTGGCTTATTCATTTCCAACTATGGATTGTTGATGGGTCAGGCACCTTCACATAAGTTGGAAGCTGTGAATGAGAAAGAGTTGGTTAGATCTAACTCAAACTTACTTCCAACTACAGCTCAGACATCTACACCTGAAATTGAAAATGTTCTCAAGACAAAAGACGAGATGAAAATGTCAAAGAAAGCTACTTCAAACAACTTCCCTTCAAATGTCAGAAGTCTGCTATCCACTGGTATGCTGGATGGCGTCTCTGTAAAGTATAAGGCATGGTCACGGGAGAAGGAACTTCGAGGTGTTATAAAAGGTGCTGGTTATTTGTGCAGCTGTCAGTCATGTAACTTTTCCAAGGTTATTAATGCATATGAGTTTGAACGACATGCTGGTTGCAAGACAAAACACCCCAATAATCATATTTACTTTGAGAATGGGAAAACTATATATGGGGTTGTACAAGAGCTCAGGAGCACTCCGCAGAATATGTTGTTTGAAGTTATTCAGACAATAACCGGTTCGCCTATCAATCAGAAATCCTTCCGTATTTGGAAAGAATCCTTTTTGGCTGCAGCACGTGAACTCCAGCGCATATGTGGAAAAGATGAAGTAAAGCAATTGTTATAA 1611 0.3904 MSFHNQAFWMGKSPGYMNDGDMSYDNSSRIESKRAHQGFMDGPEVDLFPNKKQAVEAPNNLSAGMLNSNISSWGNSSSFHSLTGHFTEQLFDPNVASMNFEDTNICPLSIDNKLGVERKDNMDPFDSDSSFGLSMSTTLGDPQLVFNHGGIRKVKVDEVKESENIMSVHSNNPYDRGVSNTVSNPHAYKGGNNSTSMSLSYDKGDANVILMDDAYDRTNNSLISMGQSYNKGDDSLSMHPTYKEICNTISMDQGVSNVDSNMISIAQAYNKAHDSSMSSNHLFNEVDDSTIPMGHTYHQRGNDMPFISHPYNKGESTIISFGGCDYDDTTSGLFISNYGLLMGQAPSHKLEAVNEKELVRSNSNLLPTTAQTSTPEIENVLKTKDEMKMSKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREKELRGVIKGAGYLCSCQSCNFSKVINAYEFERHAGCKTKHPNNHIYFENGKTIYGVVQELRSTPQNMLFEVIQTITGSPINQKSFRIWKESFLAAARELQRICGKDEVKQLL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi149g00070 536 PANTHER AUTOIMMUNE REGULATOR 8 476 - -
Sebi149g00070 536 Pfam Tify domain binding domain 429 484 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi149g00070 Sebi-Chr149 1005172 1008044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi149g00070 379 516 PHD Transcription Factor Family AT3G53680 55.797 4.39e-45 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi149g00070 - - mtr:25484103 812.372