Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi149g00034 ATGTCCAAAGAAAAAGACTCCAAATCCAAGCACAACCCACCAAATGTAGTTGCCAAACTAATGGGGCTTGAAACCCTCCCAAAGGATGAGCCTAATTTATCTGTGGTGAGAGGCCATAGAAAAGATTATTCTTCTCAACATATGTATGGCCATTTAGGGTCTCCACTCAAACATTGTCAGGTGGAAGATAGGTTTATGGATAAGGAAATGCTTCATGAAGTTCATCCAAGCACAGAACAGATTGCTTACAAAGATGCATATGAAATATGGATGCCATCTCAGAGAGCAAGCAATGTAATACCAGAGAGAGGAAGGTGGAATGATGATGTTGATGGGGAAAAAATGGCTCTCATTCATCAGAAATTCATGGAAGCAAAACATCTGTCAACAGATGAAAGATTGCGCCAGTCCAAGCAATTTGAAGATGCCTTGGAAGTTTTAAGCTCAAATAATGACCTCTTAGTCAGGTTATTGGATTCACAATATCTTCATGAACTTTACTCCACTCCACCAAATGAGACAAAGCGCATTACTCTTGTTAAACCTTTGAAGATGGTTGACAATGAGAAATCTGCTGGAAAGAGGAAGAAGAATGATAGAATGATTAAGAAAGATGATAAAGCAACTGTATGGGAGAACATGAATCCAGGATACTCTCCAGAAATTCAGAAAGTTGATGAATTTCCAGTTCAATCTACTAGAATAGTGGTCTTGAAGCCTAGCCCTGGGAGAACACATGGGCTTAAGGCTATGGTTTCTCCAACAACTTCATCACCTCGGAATCTTCAAAATGGAGATGATGGTGTACTGGAATCCATAAAATTTGCAAAAGAGATTACACAGCAAATTCATGAAGGCCTGAGGAGCTATCAAAAGGATAAAAATTTATACTCTCCAGTCTTTTCCAATGGCTATTCTGGTGATGAGGGTTTATTTAACAAATCATCATATCATGACTATAAAGCTGGGAATTTCAATGATTTGGAAGCTATGTCATCATTGCCAAGGCTTTCATGGGATTGCATCAATGGCTGGGCCAGTCCTTACTCTACACTATCCTTGGGGCGTGCATCCTGTTCTCCTGAGTCATCAGTGTGCATAGAAGCAAAGAAACGACTTTCTGAAAGATGGAGCATGATGGCATCAAATAGTAAAGCTCCTCAGGAACAAAGGCATGTAAAGAGAAGCTCTACCTTGGGTGACATGCTTTCTCTTTCCCGTATAAAGAAATCTGTAACATCTCAGGAACCAAGCAAATCTGTTTCTTGCCGCCATTCTTTCAATGAGGAAATAAGCATTGGTGATTCTCCTATAAATGTTCCCAGGTCAAATTCTGTCCCTGCATCTTCTACTGTTTATGAAACTGGGCTCAGTGTTGAGGTTTGTGATCATGATGCTGGCAAAGCACATAAGGTGCTGACAAAGTCAAAGAGTATGGGATCATCATTTAGAGGGAAAGTTAAAAGTTTCTTGTTTTCAAGGAATAAGAAATCAACCAAGAAAAAATCTAGCTCATCTCAATCTAAAGATGAATCCCAATCTACTGCCTCTGAAACATCAGATTTTCCAATCCTTAGGGATGATGTGTCTCAAAACTCCAATCTTGGCGGCTTTGAAGAATGTTCTCTTGCAGCTCTATATGAATCATCAGGCAAAACTGCAACAGATTCTGACTCTAATGGACAACATCAAGACATGATTACAATAGAGCCTGGATTGACAGAGTCAAAGGCTATGGTGCCAGAGATTTCAAGTGAAAACCAGGATCAACCTAGTCCAATCTCAGTTTTAGAACCTCCATTTGAAGATTATAATACAGCTCATGAGTCCTTGGACTATATGAAGGATGGTCACCAGGGATCATTGGTGCCTCTGAAGTCCAATTTAATAGACAAATCACCACTTATAGAATCAGTAGCTCGGACACTGTCATGGGATGATTCTTGTGCTCCTTATTCATTAGAACCCCTCAGTGTTTCTTCCTTAGACACCAAGGTAGAGGAACAAGAGTGGCTTCTTTTGGTCCAGAAACTACTATCAGCAGCTGGACTTGATGATCAAGAACAGTATGACTCCTTTCACACTAGATGGTATTCCCTTGAAAGCCCATTGGACCCATCATTGAGGGACACATATGCCAATATAAATGACAAGGACCCTCAGCATCTCCATGAGGCCAAGCGAAGGAAGATGAGATCAAATCAGAAGCTTGTGTTTGACTGTGTCAATGCAGCACTATTGGAATTTGTTGGTTATGGATCAGAGAATTACTTCAATAGCAGCATGTACAGTGGGAGCCACAGCAGGCCCCTAGTCCAAGAGGGTACACCTTCCCCTTTGATGGACCACATTGTGGCCCAAATGAAGGAATTAATAGCAAGTGGGATGAGTAGTGTGTGGGAGGATTGTGGGGACAACCACAGCCTGGTGGTAGAAAGTGTTGTCAGGAAAGAGGTTGTGCAGATTGGGTGGGTTGAGCTAATGAGGTTGGAGATTGATCTTTTGGGAAGGGAAATAGAAGGGAAGTTGATAGAAGAGCTTGTGGAGAATGCTGTGGTTGATTTTACAGGCAGGGCCTGA 2580 0.4136 MSKEKDSKSKHNPPNVVAKLMGLETLPKDEPNLSVVRGHRKDYSSQHMYGHLGSPLKHCQVEDRFMDKEMLHEVHPSTEQIAYKDAYEIWMPSQRASNVIPERGRWNDDVDGEKMALIHQKFMEAKHLSTDERLRQSKQFEDALEVLSSNNDLLVRLLDSQYLHELYSTPPNETKRITLVKPLKMVDNEKSAGKRKKNDRMIKKDDKATVWENMNPGYSPEIQKVDEFPVQSTRIVVLKPSPGRTHGLKAMVSPTTSSPRNLQNGDDGVLESIKFAKEITQQIHEGLRSYQKDKNLYSPVFSNGYSGDEGLFNKSSYHDYKAGNFNDLEAMSSLPRLSWDCINGWASPYSTLSLGRASCSPESSVCIEAKKRLSERWSMMASNSKAPQEQRHVKRSSTLGDMLSLSRIKKSVTSQEPSKSVSCRHSFNEEISIGDSPINVPRSNSVPASSTVYETGLSVEVCDHDAGKAHKVLTKSKSMGSSFRGKVKSFLFSRNKKSTKKKSSSSQSKDESQSTASETSDFPILRDDVSQNSNLGGFEECSLAALYESSGKTATDSDSNGQHQDMITIEPGLTESKAMVPEISSENQDQPSPISVLEPPFEDYNTAHESLDYMKDGHQGSLVPLKSNLIDKSPLIESVARTLSWDDSCAPYSLEPLSVSSLDTKVEEQEWLLLVQKLLSAAGLDDQEQYDSFHTRWYSLESPLDPSLRDTYANINDKDPQHLHEAKRRKMRSNQKLVFDCVNAALLEFVGYGSENYFNSSMYSGSHSRPLVQEGTPSPLMDHIVAQMKELIASGMSSVWEDCGDNHSLVVESVVRKEVVQIGWVELMRLEIDLLGREIEGKLIEELVENAVVDFTGRA 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi149g00034 859 MobiDBLite consensus disorder prediction 250 265 - -
Sebi149g00034 859 MobiDBLite consensus disorder prediction 508 528 - -
Sebi149g00034 859 Pfam Protein of unknown function (DUF3741) 120 159 IPR022212 -
Sebi149g00034 859 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 858 - -
Sebi149g00034 859 Pfam DUF761-associated sequence motif 2 28 IPR032795 -
Sebi149g00034 859 MobiDBLite consensus disorder prediction 246 266 - -
Sebi149g00034 859 MobiDBLite consensus disorder prediction 494 528 - -
Sebi149g00034 859 Pfam Domain of unknown function (DUF4378) 675 849 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi149g00034 Sebi-Chr149 448851 452395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi149g00034 1 856 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 37.596 1.66e-141 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi149g00034 - - gmx:100816611 1087.02