Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi149g00029 ATGGGAGAGGTGAAGTTACTGGGATCTTGGGCTAGTGGATACGTTTACAGGATCAAATGGGCTTTAAAACTGAAGGGTGTGACATATGAGTTTGTGGAGGAGGATTTAGCTCACAAGAGTGATTTGCTATTGCAGTATAACCCGGTTTACAAAAAGGTTCCAGTCCTTGTTCACAATGGAAAGCCAATCTCTGAATCCACTGTTATCCTTGAATACATAGAGGAAACATGGCCACAGGCACCTTTGCTTCCGAAAGACCCATATGAGAGGGCTGTGGTACGCTTCTGGGTCAATTTTGCAGAGGAAAAGAGCACTTCGATCAAGTCATTCTTTGTGTCTGTTGGAGAAGAGCTTCAGAAGGCAACACAGGAAGTTAGAGAAGTGTTCAAAATATTAGAAGAAGCCATTGGGGACAAGAAATATTTTGGTGGTGATGAAATTGGACTTTTAGACATTAACTTGGGATGGATAGCCTTGTTATTTGGAGTTGGAGTCCTTGAAGAAGTTGTTGGTGTTGAAGTGCTGGTTGTTAATGATTTCCCTCGCTTGTTTACTTGGATTCAGAACTTCAGGGAGCACCCTGCTATCAAAGCTATCCTTCCAAGTCACCAAGAGTTCTTTGCTTATTACAAGAAAAGGAGGGAGATTATTGTTGCATCCAAAACGGAATAA 672 0.4196 MGEVKLLGSWASGYVYRIKWALKLKGVTYEFVEEDLAHKSDLLLQYNPVYKKVPVLVHNGKPISESTVILEYIEETWPQAPLLPKDPYERAVVRFWVNFAEEKSTSIKSFFVSVGEELQKATQEVREVFKILEEAIGDKKYFGGDEIGLLDINLGWIALLFGVGVLEEVVGVEVLVVNDFPRLFTWIQNFREHPAIKAILPSHQEFFAYYKKRREIIVASKTE 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi149g00029 223 CDD GST_C_Tau 87 213 IPR045074 GO:0004364|GO:0006749
Sebi149g00029 223 CDD GST_N_Tau 4 77 - -
Sebi149g00029 223 Gene3D - 86 221 - -
Sebi149g00029 223 SUPERFAMILY Thioredoxin-like 4 102 IPR036249 -
Sebi149g00029 223 SFLD Main (cytGST) 1 220 - -
Sebi149g00029 223 SFLD Main.3: Omega- and Tau-like 1 220 IPR045073 -
Sebi149g00029 223 SUPERFAMILY GST C-terminal domain-like 75 217 IPR036282 -
Sebi149g00029 223 Pfam Glutathione S-transferase, C-terminal domain 116 194 IPR004046 -
Sebi149g00029 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 210 IPR010987 -
Sebi149g00029 223 Gene3D Glutaredoxin 1 85 - -
Sebi149g00029 223 FunFam Tau class glutathione S-transferase 83 220 - -
Sebi149g00029 223 FunFam Tau class glutathione S-transferase 1 85 - -
Sebi149g00029 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Sebi149g00029 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 205 IPR045073 -
Sebi149g00029 223 Pfam Glutathione S-transferase, N-terminal domain 4 74 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi149g00029 Sebi-Chr149 421848 422859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi149g00029 3 215 Glutathione S-transferase Gene Family AT2G29420 46.512 4.19e-62 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi149g00029 K00799 - gmx:100500361 320.857