Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi149g00024 ATGTTAGACACTCCCATGCTAGACCTCACCTCATGTGGAAAAATGAGAGAAGGGGCAGAAGAGGGATTTGAGTTGGGGGTTGTAACAATCTTGCCTAAGTTAGTTGAGGCTGCTGCTGCCAATCCTGTAGTTGGTTCTCAAGTTTGGGTTGAGGATTCTGATGTAGCTTGGATAGATGGTGAGGTCTTGGAGGTTAATGGGGAACAAATCAAAGTCCTTTGCACTTCAGGGAAAACGGTTGCTGTTAAAGCTTCCAGTGTTTATCATAAAGATACCGAAGCCCCGCCGTGTGGAGTGGATGATATGACCAAGCTTGCTTATCTACATGAACCTGGTGTCCTTGATAATCTGAAATCAAGATATGATATCAATGAAATTTATACATATACTGGGAATATACTGATTGCTGTAAACCCTTTCATAAAGCTTCCTCATTTATATGATAGCCATATGATGGCACAATATAAAGGAGCAGGTTTTGGTGAGCTAAGTCCTCATCCCTTTGCTGTTGCAGATGCAGCATATAGGCTTATGATCAATGAGGGAATCAGCCAGTCAATATTGGTAAGTGGTGAAAGTGGGGCTGGTAAAACAGAAAGCACCAAGTTACTCATGCGCTATCTTGCTTACATGGGAGGGAGAGCTAATTCTGGTGAAGGTAGGACTGTTGAGCAGAAAGTCCTGGAGTCCAATCCCGTTCTAGAAGCCTTTGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAATTTGACCAGAGGGGAAGAATTTCTGGAGCTGCTATCAGAACTTATCTGCTGGAAAGATCACGTGTTTGCCAGCTGTCAGATCCAGAGAGGAATTATCACTGTTTTTATATGCTCTGTGCTGCACCTCAAGAGGTTGTTCAGAAGTACAAATTAGGAAACCCAAGAACATTTCATTATCTGAATCAATCAAATTGCTTTGAGTTGGATGGGCTTGATGAGTTTAAAGAATATTGTGATACAAGGAGAGCAATGGATGTTGTTGGAATAAGTTCTGAGGAGCAGGAAGCAATATTTCGAGTGGTTGCTGCAATTTTGCATCTTGGGAACATTGAATTTACAAAAGGGAAGGAAGTTGACTCATCTATGCCCAAAGATGAAAAATCTCGGTTTCATCTACAAACTGCTGCTGAACTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAGCGTGTAATTGTTACTCGTGATGAAACTATCACAAAATGGCTGGATCCAGACGCTGCTGCACTTAGCCGAGATGCTTTGGCTAAGATTGTGTACACGAGGTTGTTTGACTGGCTGGTGGATAAAATTAATAATTCAATTGGTCAAGATCCTGACTCAAAGTCCTTAATTGGTGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGGTGA 1446 0.4136 MLDTPMLDLTSCGKMREGAEEGFELGVVTILPKLVEAAAANPVVGSQVWVEDSDVAWIDGEVLEVNGEQIKVLCTSGKTVAVKASSVYHKDTEAPPCGVDDMTKLAYLHEPGVLDNLKSRYDINEIYTYTGNILIAVNPFIKLPHLYDSHMMAQYKGAGFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRANSGEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAAPQEVVQKYKLGNPRTFHYLNQSNCFELDGLDEFKEYCDTRRAMDVVGISSEEQEAIFRVVAAILHLGNIEFTKGKEVDSSMPKDEKSRFHLQTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPDAAALSRDALAKIVYTRLFDWLVDKINNSIGQDPDSKSLIGVLDIYGFESFKTNR 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi149g00024 481 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 43 92 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi149g00024 481 PRINTS Myosin heavy chain signature 232 259 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi149g00024 481 PRINTS Myosin heavy chain signature 184 209 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi149g00024 481 PRINTS Myosin heavy chain signature 465 481 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi149g00024 481 PRINTS Myosin heavy chain signature 127 146 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi149g00024 481 FunFam Myosin 2 348 460 - -
Sebi149g00024 481 Pfam Myosin head (motor domain) 99 480 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi149g00024 481 Gene3D Myosin VI head, motor domain, U50 subdomain 348 480 - -
Sebi149g00024 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 480 IPR027417 -
Sebi149g00024 481 Gene3D Kinesin motor domain 47 327 IPR036961 -
Sebi149g00024 481 SMART MYSc_2a 92 481 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi149g00024 481 ProSiteProfiles Myosin motor domain profile. 97 481 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi149g00024 481 PANTHER MYOSIN 92 480 - -
Sebi149g00024 481 Pfam Myosin N-terminal SH3-like domain 45 87 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi149g00024 Sebi-Chr149 325588 329880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi149g00024 38 480 Myosins gene family AT1G04160 79.910 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi149g00024 K10357 - tpra:123898663 853.588