Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi149g00019 ATGTATGACATATTAGGTTCTTTTCCTGCAGCAAAGTTGGTTTCTACAACAGTGTGGTTAGTTAAACCTTCTTCTGGGCCATCTTCTGCTCCTGTGCCACCTCCATCTTACCAAGGTCCTAGTGTGATACCAAGACCAAAACATCCTCATCATGATCATCGTCACCGCAGCATGAAGCCTTATGCTGTGGCTCCGTCCCCTTCTGAAGACCAAGTAATTAATGAGTTAGAGATTGAAGTTGCATCTGGAACGTACTTGAAGCAAAGCCAGGTGAGGATAATGGGTGTCAGTCCTGACATTCAAAATCCTGGAAGAGCCATAGTTGATATTAACTTGGTTCCACTTGGAGAGAAGTTTGACAATACTACTGCAGTTCTGACATATGAGAGATTTTGGCACAAGAAAGTTCCTCTAAATAGGAGTCTTTTTGGTGATTACACAGTCTTGTCCGCTACTTATCCAGGGATGCCATCTCCTCCGCCACATGGAACCTTAGCTGGGTGTGGTCCTGATCACCGTGAAAGTGAAGAAGGTATTATCCCATTCACTGCTGATTTTATCAGCAAGAGTGAGAAGATGAGTCTCAGGACCATAATCATCATTGCTTTGTCTTCCATTTTACTCTTGGTGGTTTTGGTTGGAGCATTGTCCATTTTTTTTAAATGGAGAAAAATTAGGAGACCATCAAGTTCTGTTGGCCCTGGATTCACATCGTCACTAAACAAGAGATCTGCCATGGAGTCTATGTTGTCAAGCAGAATTACAAGCTCAAGATCAATGTCGCTTGTGTCCACCATGGCTACTTCTATTCTCTCTGTTAAAACATTTTCCTTTTCTGAGCTTGAGAAGGCAACAGATAAGTTCAGTTCACAAAGGGTATTAGGAGAAGGAGGATTTGGGCGTGTTTATCATGGGACATTAGATGATGGAAGTGATGTTGCAGTTAAGCTGCTAACAAGGGATAATCAGAATGGAGACCGTGGATTTATCGTGGAAGTTGAGATGCTATGCCGTTTGCATCATCGTAATCTTGTGAAATTAATTGGTATATGCATACAAGGGCGCAGGCGCTGCTTAGTGTATGAGCTTGTTCGCAATGGCAGTGTCGAGTCTCATTTGCATGGTAATTGGTATCATATTTTCTTCAGCTCTGGAGTTACACTACACAGACTGGTTGTGAATCTGATGGGCATAACAGGTGCAGATGGATCCCGCGTGTATCTGGAGAATCTTGTAACATGGGCACGGCCACTGTTGACAAGCAGAGAAGGTTTAGAACAGCTGGTGGATCCGTCTTTGGCTGGAAGTTATGACTTTGATGACATGGCAAAAGTGGCTGCTATTGCTTCCATGTGTGTACACCCAGAGGTCACTCAAAGACCTTTTATGGGTGAAGTTGTACAGGCTCTTAAGTTGATATACAATGACAGAGACGAGACCAGTGTGGATTGCTGTAGTTGGAAGGAGTCTTCTGAGTCTGATTTTAGAGATGACATTGCCTTTTATGATAGCAGCAGGTGGAATATTGAAGGGTTAACCCCTCGATTAGCTTATGGGCAACCATCTTCCTTCATCACAATGGAATACAGTTCTGGTCCACTTGAAGGAGTGGAAAAAAGACACCTTTCGGCTTCAAGCTTGATTGGGGACGAGATGCCTTTACCAATTAGGGATGGGAATAGATCAGGTCCCTTGAGAACATCCCGGAGCAAGCTATCCTTCTATAGGTTTACTGGAAGTCTGAGTGAACATGGAATACTTCCTTCCAAACGTGTTTGGAATGATGGTAACTGGCCTTAA 1800 0.435 MYDILGSFPAAKLVSTTVWLVKPSSGPSSAPVPPPSYQGPSVIPRPKHPHHDHRHRSMKPYAVAPSPSEDQVINELEIEVASGTYLKQSQVRIMGVSPDIQNPGRAIVDINLVPLGEKFDNTTAVLTYERFWHKKVPLNRSLFGDYTVLSATYPGMPSPPPHGTLAGCGPDHRESEEGIIPFTADFISKSEKMSLRTIIIIALSSILLLVVLVGALSIFFKWRKIRRPSSSVGPGFTSSLNKRSAMESMLSSRITSSRSMSLVSTMATSILSVKTFSFSELEKATDKFSSQRVLGEGGFGRVYHGTLDDGSDVAVKLLTRDNQNGDRGFIVEVEMLCRLHHRNLVKLIGICIQGRRRCLVYELVRNGSVESHLHGNWYHIFFSSGVTLHRLVVNLMGITGADGSRVYLENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDRDETSVDCCSWKESSESDFRDDIAFYDSSRWNIEGLTPRLAYGQPSSFITMEYSSGPLEGVEKRHLSASSLIGDEMPLPIRDGNRSGPLRTSRSKLSFYRFTGSLSEHGILPSKRVWNDGNWP 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi149g00019 599 MobiDBLite consensus disorder prediction 27 42 - -
Sebi149g00019 599 FunFam receptor-like serine/threonine-protein kinase ALE2 261 363 - -
Sebi149g00019 599 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Sebi149g00019 599 MobiDBLite consensus disorder prediction 24 58 - -
Sebi149g00019 599 Gene3D Phosphorylase Kinase; domain 1 260 363 - -
Sebi149g00019 599 SUPERFAMILY Protein kinase-like (PK-like) 253 387 IPR011009 -
Sebi149g00019 599 ProSiteProfiles Protein kinase domain profile. 288 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi149g00019 599 PANTHER OS01G0750732 PROTEIN 69 375 - -
Sebi149g00019 599 Gene3D Transferase(Phosphotransferase) domain 1 381 492 - -
Sebi149g00019 599 Pfam Protein tyrosine and serine/threonine kinase 290 382 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi149g00019 Sebi-Chr149 270338 274916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi149g00019 382 585 Receptor kinase-like Gene Family AT5G56890 43.810 4.21e-27 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Sebi149g00019 PK_Tyr_Ser-Thr 3.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi149g00019 - - lja:Lj0g3v0221179.1 505.753