Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi149g00008 ATGGATGTCACACGATTTTTCGATAAAATCTTAGCTTCAACTTCTTCTTCTTCAGGATCGTCGAATATCTTTTTGAACACGATCCTAGGATTGCCTGTGTTGGAACTTGCGGCAATATGTGTGAACCTGACCCTTGTTTTGTTGTTTCTCTTTGTTGCCTCCGTGAGACGGATTCTTGTGTATGAGGGTCGATTTGTAAAGGACAGCACCGCCGGCAATGCCAGCCCAATTTGCAGTGTTATTAATAGAGAAACACGTGATGTTCGAATCGGTGTAGTGTTCAAGTTGTCAGTGTTGTCTTGTTTTTATGTTCTGTTTGTGCAAGTTTTGGTGTTGGGGTTTGATGGGGGTGGGGCTAATGGGAAGCCTGTGGACTGGTCTCTTCTTTTTGTGCCAGCTTCACAGGGTTTAGCTTGGTTTGTGTTGAGCTTTTCTGCTTTGTATTGCAAATTCAAGGAGTCAGAGAAGTTTCCATTTTTGTTGAGAGTTTGGTGGTTTTTGTCATTTGTTATTTGCTTGTGTAATTTATATGTTGATGGGAGAGGATTTTGGGTCGAAGGTTCCAAGTACCTCTCTTCTCATGTTGTTGCAAATTTTGCTGTCACACCAGCTCTTGCCTTTTTGTGTGTAGTTGCAATTAGGGGTGTTACTGGTATACAAGTTTGTAGAAACCCTGATCTTCAAGAGCCATTACTTGTTGAAGAAGAACCAGGGTGTCTTAAGATTACTCCTTATAGAGATGCTGGACTTTTTAGCTTGGCTACTCTTTCTTGGCTGAATCCACTTCTTTCCATTGGTGCAAAGAGACCGCTTGAGCTTAAGGACATTCCCCTTGTTGCACCAAAAGATCGAGCCAAGACAAGTTACAAGGTTTTGAATTCTAATTGGGAGAGATTGAAGGCTGAGAATCCCTCTAAGCAGCCTTCATTAGCTTGGGCAATTCTCAAGTCATTCTGGAGAGAAGCAGCTCTGAATGCCATATTTGCTGGTGTGAATACTTTGGTGTCATATGTAGGTCCATACATGATAAGTGACTTTGTTGATTACTTGGGTGGAAAAGAAACTTTTCCTCATGAGGGATATATCCTTGCGGGTATATTCTTTGTGGCAAAGCTTGTGGAGACCCTAACAACCAGGCAATGGTATCTAGGAGTAGACATTTTGGGTATGCATGTCAGGTCAGCTCTAACTGCAATGGTATATAGAAAGGGACTCAGATTATCAAGCTTGGCCAAGCAAAGTCATACTAGTGGAGAGATTGTCAACTACATGGCTGTTGATGTTCAGAGAGTAGGGGACTACTCTTGGTACCTTCATGACATGTGGATGCTTCCTCTGCAGATTGTTCTTGCCCTTGTAATTTTGTATAAGAATGTTGGAATTGCTTTTGTTGCTACATTGATTGCTACAATCATTTCCATTGTTGCCACTGTTCCTGTGGCTAAGATACAAGAAGATTATCAAGACAAATTAATGGCTGCTAAGGATGAAAGGATGAGAAAAACATCTGAGTGTCTCAGGAATATGAGGATTCTCAAGCTGCAAGCTTGGGAGGATAGATACAGAATAAAATTGGAGGAAATGCGTGGAGTAGAATTCAAGTGGCTCAAGAAAGCACTTTATTCTCAAGCTTTCATAACTTTCATATTCTGGAGCTCCCCTATATTTGTTTCAGCAGTCACTTTTGCTACTTCCATATTGTTAGGAGGTCAGCTGACTGCAGGTGGTGTTCTATCTGCTCTAGCTACTTTCAGGATTCTCCAAGAACCTCTGAGAAATTTTCCTGACTTGGTATCTACCATGGCTCAGACAAAGGTTTCTCTTGATCGCATATCTGGTTTCCTGCAGGATGAAGAGTTGCAGGAAGATGCAACTATTGTCTTGCCACATGGCATGTCTAACAATGCTGTAGAAATTGAGGATGGTGTCTTCTCTTGGGACCCTTCTTTGTGTAGGCCTACTCTATCAGGAATACATATGAAAGTGGAAAGGGGGATGACTGTGGCTGTTTGTGGTGTGGTTGGTTCTGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAGATTCCCAAGCTTTCTGGTGAAGTAAGGGTGTGTGGTTCTGCTGCATATGTCTCCCAATCAGCATGGATACAGTCAGGAAATATAGAAGAAAACATCCTGTTTGGAAACCCAATGGACAAAGCAAAGTACAAGAATGTTCTTCATGCTTGTTCACTGAAAAAGGACCTAGAACTTTTCTCACATGGAGACCAAACAATTATTGGTGATAGAGGTATAAACTTGAGTGGTGGCCAGAAGCAGCGGATTCAGCTTGCAAGAGCACTCTACCAAGATGCAGATATTTATCTTCTTGATGATCCCTTTAGTGCAGTTGATGCCCACACTGGATCAGAATTATTCAGAGAGTATGTATTGACAGCACTAGCAGATAAAACAGTCATTTTTGTGACCCATCAAGTTGAATTTCTTCCTGCTACTGATATGATACTGGTTCTTAAAGAAGGTCACATCATACAAGCAGGAAAGTATGATGATCTTTTACAGGCAGGAACAGATTTTAGAACTCTAGTTTCAGCTCACCATGAAGCAATAGAGGCTATGGACATTCCTACTCACTCAGAAGATTCAGATGAAAATGTGACCTTGGATGCATCTGTTTTGACCAGTAAGACATCCATTTCTTCTGCAAATGATATTGACAGTTTGGCAAAGGAAGTTCAAGAAGGATCATCTGATCAGAAAGCAATTAAGGAGAAGAAGAAGAAAGCAAAGCGCTCAAGAAAAAAACAGCTTGTTCAGGAAGAGGAGAGGGTTAGAGGTAGAGTCAGCATGAAGGTGTACTTGTCCTACATGGCTGCAGCATATAAAGGCTTATTGATTCCCCTTATAATCATTGCACAAACATTATTTCAGTTCCTTCAGATTGCCAGTAATTGGTGGATGGCTTGGGCAAATCCTCAAACAGAGGGAGACCAACCCAAAGTAACTCCCACGGTTCTACTTCTTGTTTACATGGCCCTTGCTTTTGGCAGTTCATGGTTCATATTTGTAAGGGCTGTTCTCGTGGCTACATTTGGTCTAGCAGCTGCACAGAAACTATTTTACAACATGCTGAGAAGTATTTTCCGTGCACCAATGTCTTTCTTTGATTCTACACCAGCTGGAAGGATCTTGAATCGGGTTTCAATTGATCAAAGTGTGGTGGATCTTGACATTCCTTTTAGATTAGGAGGGTTTGCTTCATCAACAATACAGCTTATTGGCATTGTTGGTGTAATGACAGAAGTTACATGGCAAGTTTTGCTCCTAGTAGTCCCAATGGCAATTGTTTGTTTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAACTGGTACGCATTGTAAGCATTCAGAAATCTCCAGTTATACAACTTTTTAGCGAATCAATTGCTGGAGCAGCCACCATAAGAGGCTTTGGACAAGAAAAAAGGTTCATGAAGAGGAACCTATATCTTCTGGATTGTTTTGCACGACCATTCTTCTGCAGTCTCGCAGCTATTGAGTGGCTCTGTCTGCGCATGGAATTGCTTTCAACCTTTGTATTTGCTTTCTGCATGGTATTACTTGTGAGCTTTCCCCGTGGAAGTATTGATCCTAGCATGGCTGGACTTGCTGTGACGTATGGCCTGAATTTAAATGGACGTCTATCACGGTGGATACTTAGCTTTTGCAAACTTGAAAATAAAATTATCTCTATTGAAAGAATTTATCAGTACAGCCAAATTCCTAGTGAAGCACCTGCAATTATTGAAGATTCTCACCCTCCATCCTCATGGCCTGAGAATGGGACAATCCAACTAATTGATCTGAAGGTCCGTTACAAGGAAAATCTCCCTTTGGTACTTCATGGAGTATCCTGCACATTTCCTGGTGGGAAGAAAATTGGAATAGTTGGACGAACTGGCAGTGGCAAAACTACTTTGATTCAAGCATTATTTCGATTGGTTGAACCGGCATCTGGGAGTATCCTTATAGACAACATCAACATTTCAGGCATTGGCCTTCATGACCTTCGAAGCCATCTCAGTATCATACCACAAGATCCAACCTTATTTGAAGGCACCATTCGAGGCAATCTTGATCCCCTTGAAGAGCACTCTGATAAAGAGATTTGGGAGGCATTAGATAAGTCTCAGCTTGGAGAGATCATCCGTGAGAAAGGGCAAAAGCTTGATACACCAGTGCTAGAAAATGGAGATAATTGGAGTGTAGGACAGCGGCAACTGGTTTCTCTTGGCCGAGCTCTTCTTAAACAATCAAAGATACTTATACTTGATGAAGCAACGGCATCTGTTGATACTGCTACTGATAATCTTATCCAGAAGATTATTCGAAAAGAGTTTAGAGACTGCACTGTTTGCACTATTGCACATCGTATTCCTACTGTCATTGACAGTGATCTAGTTCTCGTACTCAGTGATGGTCGAGTTGCGGAGTTTGACACTCCATCACGGCTATTAGAGGATAAGTCATCCATGTTTCTGAAGTTGGTCACTGAATATTCATCGCGATCAAGTGGCATACCAGATTTATAA 4581 0.4163 MDVTRFFDKILASTSSSSGSSNIFLNTILGLPVLELAAICVNLTLVLLFLFVASVRRILVYEGRFVKDSTAGNASPICSVINRETRDVRIGVVFKLSVLSCFYVLFVQVLVLGFDGGGANGKPVDWSLLFVPASQGLAWFVLSFSALYCKFKESEKFPFLLRVWWFLSFVICLCNLYVDGRGFWVEGSKYLSSHVVANFAVTPALAFLCVVAIRGVTGIQVCRNPDLQEPLLVEEEPGCLKITPYRDAGLFSLATLSWLNPLLSIGAKRPLELKDIPLVAPKDRAKTSYKVLNSNWERLKAENPSKQPSLAWAILKSFWREAALNAIFAGVNTLVSYVGPYMISDFVDYLGGKETFPHEGYILAGIFFVAKLVETLTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPLQIVLALVILYKNVGIAFVATLIATIISIVATVPVAKIQEDYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIKLEEMRGVEFKWLKKALYSQAFITFIFWSSPIFVSAVTFATSILLGGQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRISGFLQDEELQEDATIVLPHGMSNNAVEIEDGVFSWDPSLCRPTLSGIHMKVERGMTVAVCGVVGSGKSSFLSCILGEIPKLSGEVRVCGSAAYVSQSAWIQSGNIEENILFGNPMDKAKYKNVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRIQLARALYQDADIYLLDDPFSAVDAHTGSELFREYVLTALADKTVIFVTHQVEFLPATDMILVLKEGHIIQAGKYDDLLQAGTDFRTLVSAHHEAIEAMDIPTHSEDSDENVTLDASVLTSKTSISSANDIDSLAKEVQEGSSDQKAIKEKKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYKGLLIPLIIIAQTLFQFLQIASNWWMAWANPQTEGDQPKVTPTVLLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFYNMLRSIFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASSTIQLIGIVGVMTEVTWQVLLLVVPMAIVCLWMQKYYMASSRELVRIVSIQKSPVIQLFSESIAGAATIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPRGSIDPSMAGLAVTYGLNLNGRLSRWILSFCKLENKIISIERIYQYSQIPSEAPAIIEDSHPPSSWPENGTIQLIDLKVRYKENLPLVLHGVSCTFPGGKKIGIVGRTGSGKTTLIQALFRLVEPASGSILIDNINISGIGLHDLRSHLSIIPQDPTLFEGTIRGNLDPLEEHSDKEIWEALDKSQLGEIIREKGQKLDTPVLENGDNWSVGQRQLVSLGRALLKQSKILILDEATASVDTATDNLIQKIIRKEFRDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPSRLLEDKSSMFLKLVTEYSSRSSGIPDL 1526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi149g00008 1526 CDD ABCC_MRP_domain2 1278 1498 - -
Sebi149g00008 1526 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 632 859 IPR027417 -
Sebi149g00008 1526 SUPERFAMILY ABC transporter transmembrane region 960 1260 IPR036640 GO:0005524|GO:0016020
Sebi149g00008 1526 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1270 1510 IPR027417 -
Sebi149g00008 1526 FunFam ABC transporter C family member 10 306 619 - -
Sebi149g00008 1526 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 246 1517 - -
Sebi149g00008 1526 MobiDBLite consensus disorder prediction 911 931 - -
Sebi149g00008 1526 FunFam ABC transporter C family member 3 1263 1515 - -
Sebi149g00008 1526 CDD ABC_6TM_ABCC_D1 324 611 IPR044746 GO:0140359
Sebi149g00008 1526 Pfam ABC transporter 655 789 IPR003439 GO:0005524
Sebi149g00008 1526 SUPERFAMILY ABC transporter transmembrane region 312 619 IPR036640 GO:0005524|GO:0016020
Sebi149g00008 1526 CDD ABCC_MRP_domain1 637 836 - -
Sebi149g00008 1526 Gene3D - 1263 1516 IPR027417 -
Sebi149g00008 1526 FunFam ABC transporter C family member 5 924 1261 - -
Sebi149g00008 1526 CDD ABC_6TM_ABCC_D2 961 1255 IPR044726 GO:0140359
Sebi149g00008 1526 FunFam ABC transporter C family member 5 622 869 - -
Sebi149g00008 1526 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 323 603 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi149g00008 1526 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 963 1233 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi149g00008 1526 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1280 1514 IPR003439 GO:0005524
Sebi149g00008 1526 Pfam ABC transporter 1297 1445 IPR003439 GO:0005524
Sebi149g00008 1526 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524|GO:0016887
Sebi149g00008 1526 Gene3D - 631 865 IPR027417 -
Sebi149g00008 1526 Pfam ABC transporter transmembrane region 326 591 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi149g00008 1526 Pfam ABC transporter transmembrane region 963 1205 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi149g00008 1526 Gene3D ABC transporter type 1, transmembrane domain 293 620 IPR036640 GO:0005524|GO:0016020
Sebi149g00008 1526 Gene3D ABC transporter type 1, transmembrane domain 922 1261 IPR036640 GO:0005524|GO:0016020
Sebi149g00008 1526 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 637 860 IPR003439 GO:0005524
Sebi149g00008 1526 SMART AAA_5 1306 1491 IPR003593 GO:0016887
Sebi149g00008 1526 SMART AAA_5 664 845 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi149g00008 Sebi-Chr149 97266 105035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi149g00008 637 853 Calmodulin-binding Proteins AT2G36910 31.780 1.19e-19 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi149g00008 - - gmx:100781010 2689.06