Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi148g00031 ATGGCTGGGATTGATGATAATGTTGCTCTTACTGGTGATTGGGGTCTTGCTAGCCCTAGTCCAAGGACCCTTTTTTCTAGAATGCTAGATGAAGATAATTTAACAAGATCAATCTCAGAACAACCTGGAAGTGATGGAACTGAGGATCTCTTTCTGGGAACTCATGGGCCCTGTGAGACAGGGAAAGGAAACATAAAAGATAGGACACAAGATGGTGATTCTGGTGCCCAATTGACTGACATGAGTTTTGGAATGGAGCAGAAGTCGAGCTCACGGGGTGGTCTTGTTGAAAGAATGGCAGCTAGAGCTGGGTTTAATGCTCCAAGGTTGAATACAGAAGGCATTAGATCTACTGACCTTTCACTTAATTCTGACATTCAGTCTCCTTACTTGACTATACCGCCTGGTCTCAGTCCTACTACACTTTTAGATTCTCCAGTGTTCCTTGCAATTCACTGTTTTCAGAGTCCTAAGTTTCACTTTTCCTTTTACTTTCTGCCAAAGGCACCCGTAGTGGCACAGCCATCCCCAACAACAGGGAAGTTTCCATTTGTCTCAAATGGCAACATCCGGTGCTCAGAATTATCATCTGATGCTCCAGAAAAATGTAAAGATAGCGGCTTTGATGATATCTATGCATCATCCTTTGCTTTCAAGCCTACAGCAGATCCAGCCTCTTCTTTTTATCATGGTGCTGGAACAAAAATAAATCCAGCTACACTTCATCAACAATCCCTACCAGCTTCAGTTCAACTTCATCGAATCGCAACCTCAAAAAGATATGGAATTAAAATGTTCTCAACTGATCAAAGGGCTTTTGATGCTGTTGGCGGTAACATTGAACATTCTACACCACCTGAAGAGCAAGCAGATGAAGAGGGAGATCAAGAGGCAATGGAGACTCAATGGCTGCTGGTGCTGGTGGTGCAACCATCTGAAGATGGATATAACTGGAGAAAATATGGCCAAAAGCAGTTAAGGGTAGTTAAGAAGAAAGTAGAACGTTCTCATGAGGGCCACATAACAGAGATCATCTATAAGGGAGCACACAACCATCCGAAACCTCCTCAAATCGCCGGCAGGCATAGGGCATCTGTCGGCCCTGAGTACTGCAACCAGTCCACCAATTTGCAGACACAAAATAGTACTCACTTTGATTCAGGAGATGCAGTGGATGCCTCATCTACTTTTTCTAATGAAGAAGATGAAGATGATCAAGGAACTCATGGTAGTGTATCCTTAGGTTATGATGGGGAAGGAGATGAATCAGAGTCTAAAAGAAGGAAACTGGAATCATATGCAACAGAGTTGAGTGGAGCTACAAGAGCTATTCGTGAGCCTAGAGTTGTTGTACAGACTACCAGTGAAGTAGATATCCTGGATGATGGTTATCGGTGGCGGAAATATGGTCAAAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGCACCAATGCAGGGTGCACAGTAAGGAAGCATGTTGAGAGAGCATCACATGACCTTAAATCTGTGATCACTACATATGAGGGAAAGCACAACCATGATGTTCCCGCTGCTCGTGCTAGCAGTCATGTGAATGCAAACGCTTCAAACACTGTTCCTGGGCAAGCTTCTGGTGTTCTTCAAACCCATGTTCATAGACCTGAACCATCTCAAGTTCACAATGGCATTGGAAGGCTTGAGAGGCCATCCCTTGGCTCATTCAGCCTTCCTGGGAGGCAGCAGTTAGGTCCCTTCCATGGCTTCTCCTTTGAGGCTATACCGGAACAATCACCACTAGTAGAAGAAATAAATGGATCCGCAACAGGAACAGAAAAACCAATACCAAAACCTATCCCCAGTGAAAGACTGCATCCAAAAAACCAAAACGATTCAGTTCTTGGACGCACCACTCCGATCAACAGCCACCTCGCGGGGCTTGAGTTTTGGAGGCACCTCGAGAGAGATGCAGAAGCTCGCGAAGCCTTCAAGTGTCAAGCCATGGAAGATAGACTGATTGAATTGGAAGCTCTAGAGAAGGCCATACAGGAAGGAACAGAAGCCTATGATAAGATGCAAGCTGAGCTCATAAAATCCAGGCAAAGCCCAACAAATCCTGGAGACAAGCCTTCCCAACTTGGTGAGAAGTTCTTCGGAAATCCTTCAAGAAAGTTCGATATAGCTCTGTGGCTTTTGCACTCTGCGCGTAAGATGATCGACGAAATGCCTCAAGTGAATGTTGTTTCTTGGATTGAATTAATTGTTGCTTATTCTAGGAGTGGTAATATGAATTCTGCTCAGAATTTGTTTGATGAAAATCCTCTACGCCCTCCGTTCAATATTGAGGGTGTTGATTCACTAATGTGTGCTAGCGGTTTCTGCCACTTTGAAGAATTTGACTCGAGTAGAGGGTATTAG 2406 0.4431 MAGIDDNVALTGDWGLASPSPRTLFSRMLDEDNLTRSISEQPGSDGTEDLFLGTHGPCETGKGNIKDRTQDGDSGAQLTDMSFGMEQKSSSRGGLVERMAARAGFNAPRLNTEGIRSTDLSLNSDIQSPYLTIPPGLSPTTLLDSPVFLAIHCFQSPKFHFSFYFLPKAPVVAQPSPTTGKFPFVSNGNIRCSELSSDAPEKCKDSGFDDIYASSFAFKPTADPASSFYHGAGTKINPATLHQQSLPASVQLHRIATSKRYGIKMFSTDQRAFDAVGGNIEHSTPPEEQADEEGDQEAMETQWLLVLVVQPSEDGYNWRKYGQKQLRVVKKKVERSHEGHITEIIYKGAHNHPKPPQIAGRHRASVGPEYCNQSTNLQTQNSTHFDSGDAVDASSTFSNEEDEDDQGTHGSVSLGYDGEGDESESKRRKLESYATELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNANASNTVPGQASGVLQTHVHRPEPSQVHNGIGRLERPSLGSFSLPGRQQLGPFHGFSFEAIPEQSPLVEEINGSATGTEKPIPKPIPSERLHPKNQNDSVLGRTTPINSHLAGLEFWRHLERDAEAREAFKCQAMEDRLIELEALEKAIQEGTEAYDKMQAELIKSRQSPTNPGDKPSQLGEKFFGNPSRKFDIALWLLHSARKMIDEMPQVNVVSWIELIVAYSRSGNMNSAQNLFDENPLRPPFNIEGVDSLMCASGFCHFEEFDSSRGY 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi148g00031 801 SUPERFAMILY WRKY DNA-binding domain 308 355 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi148g00031 801 MobiDBLite consensus disorder prediction 602 634 - -
Sebi148g00031 801 MobiDBLite consensus disorder prediction 368 395 - -
Sebi148g00031 801 MobiDBLite consensus disorder prediction 419 433 - -
Sebi148g00031 801 FunFam WRKY transcription factor 33 447 513 - -
Sebi148g00031 801 Pfam WRKY DNA -binding domain 461 517 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi148g00031 801 MobiDBLite consensus disorder prediction 70 89 - -
Sebi148g00031 801 Gene3D Tetratricopeptide repeat domain 718 790 IPR011990 GO:0005515
Sebi148g00031 801 Gene3D WRKY domain 447 513 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi148g00031 801 ProSiteProfiles WRKY domain profile. 455 520 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi148g00031 801 MobiDBLite consensus disorder prediction 36 92 - -
Sebi148g00031 801 SUPERFAMILY WRKY DNA-binding domain 452 520 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi148g00031 801 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 251 535 IPR044810 GO:0003700
Sebi148g00031 801 Coils Coil 671 691 - -
Sebi148g00031 801 Coils Coil 798 801 - -
Sebi148g00031 801 SMART WRKY_cls 312 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi148g00031 801 SMART WRKY_cls 460 519 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi148g00031 801 MobiDBLite consensus disorder prediction 277 297 - -
Sebi148g00031 801 MobiDBLite consensus disorder prediction 349 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi148g00031 Sebi-Chr148 813540 819298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi148g00031 1 587 WRKY Transcription Factor Family AT5G56270 46.413 5.74e-143 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi148g00031 WRKY 4.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi148g00031 K18835 - gmx:100796545 843.188