Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi148g00004 ATGACAAAGGAGAATGAATTAATAAACAATGAAGGTGATCCTCCATTGGATAGAATCAGTGCGGGAAATTCTAATGCACACTCTCATGTCTCTAATGTTGATTGTGAAGTTGACCCACCTGTGGCCAAAAGTAATGTTGATCAACATTTGGTCAAAAGCAATGAAGGTGAAGATGATGATCGAGGCAAGAAGAAGAAGAAGAAACCGAGTGTAGAAAGCAAACATAAGGAGTATAATGAGTTCAAAAGCAATGAAGGTCAAGATGATGACCAAGGCAAGAAGAAGAAGAAAAAGAAACTGAGTGAAGGAAGCAAACATAAGGAGTATAATGAGTTCAGAAGCAATGAAGGTGAAGTTAATGACCAAGGCAAGAAGATGAAGAAGCAGAAGAAACTAATTGAAGAAAGCAAACTTAATAAATATAATGAGTTTAGAAGTGATGAAGGTGAAGATGGTGACCAAGGCAAGAAGATGAAAAAGAAACTGAGTAACAAAAGCAGAAGTAAGGAGAACAGTGAGTTTGATAGGAATGAAGATGATCCACCTTTGGCTAGGGTCAAGTCAGGAGATGCTAATGCTTGTTCTATTGTCACTGAAGTTAATGATCAAGGCAAGGAGATGAAGAAAGAAAAGACACCTAAGGTAAGTACTGGTGGATCTCCTAACCCTGCATGTGATGGAACATCCAAACCCAAACGAGTAACTTTTTCTGATCATGTAGAGGTTTGTTGTGATGGCTTAGTGCGTGGGAAAAGGTATACACGAGAAGAAGATGAGAAGATCAAAGCAGCTGTCTCTGACTATATAGAGTCTCATGGTTTGGGAGATGAAGGTCTAGATATGGTTCTCCATTGCAAGAAACATCCTGAAAGCCGTAAGTGGACACGTGATGAGCTTGAATTTGTACGGAAGGTCCAGGAACAACATGGATCTGATTGGAAATCAGTAGCTGAAGCTTTGGATAAAAGCCGAGTTCATATAAAGGATGCATGGCGTAGAATAAAATCAGCCAATCTAAATAGAGGACGATGGACCCAAGAGGAGATTCAAAAGTTATTTGATTTAGTAAACCTGGATCTACGCGCGAGGGCTTCAGAAGGTTTTAGAAAATCTAAACATGGTATGTTGCGAGATAATATTAGTTGGGAAGCAATTGGTAGCAAATTGACCACTAGAACCAGTCCAGTGTGCTGCAAAAAGTGGTATGAGAAATTAGCATCACCTATGGTTTCTAAGGGTGAGTGGTCTGACACTGATGACTACCGCTTGGTAAATGCTTTATATGCTTTGGATGCATGCTGCATGGAGGAGGTAGACTGGGACAATCTGCTTGAGCATAGGTCTGGTGATGTATGCAGAAAACGATGGAACCAAATGGTCCAACAAATTGGAGAGCATGGAGGGAAGCCATTTGCTGAGCAGGTTGAAATTCTTTCCAAGATATTGCCCCCACTTATTGGAAGCAGAGAGGACTTTGATAACAAACCTGTGGTTTGTTGA 1500 0.4047 MTKENELINNEGDPPLDRISAGNSNAHSHVSNVDCEVDPPVAKSNVDQHLVKSNEGEDDDRGKKKKKKPSVESKHKEYNEFKSNEGQDDDQGKKKKKKKLSEGSKHKEYNEFRSNEGEVNDQGKKMKKQKKLIEESKLNKYNEFRSDEGEDGDQGKKMKKKLSNKSRSKENSEFDRNEDDPPLARVKSGDANACSIVTEVNDQGKEMKKEKTPKVSTGGSPNPACDGTSKPKRVTFSDHVEVCCDGLVRGKRYTREEDEKIKAAVSDYIESHGLGDEGLDMVLHCKKHPESRKWTRDELEFVRKVQEQHGSDWKSVAEALDKSRVHIKDAWRRIKSANLNRGRWTQEEIQKLFDLVNLDLRARASEGFRKSKHGMLRDNISWEAIGSKLTTRTSPVCCKKWYEKLASPMVSKGEWSDTDDYRLVNALYALDACCMEEVDWDNLLEHRSGDVCRKRWNQMVQQIGEHGGKPFAEQVEILSKILPPLIGSREDFDNKPVVC 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi148g00004 499 MobiDBLite consensus disorder prediction 50 185 - -
Sebi148g00004 499 Pfam Myb-like DNA-binding domain 294 352 - -
Sebi148g00004 499 SUPERFAMILY Homeodomain-like 291 348 IPR009057 -
Sebi148g00004 499 ProSiteProfiles Myb-like domain profile. 286 335 IPR001005 -
Sebi148g00004 499 CDD SANT 293 335 IPR001005 -
Sebi148g00004 499 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 292 339 IPR017930 -
Sebi148g00004 499 ProSiteProfiles Myb-like domain profile. 336 405 IPR001005 -
Sebi148g00004 499 SMART sant 411 462 IPR001005 -
Sebi148g00004 499 SMART sant 290 337 IPR001005 -
Sebi148g00004 499 SMART sant 340 407 IPR001005 -
Sebi148g00004 499 ProSiteProfiles Myb-like domain profile. 407 460 IPR001005 -
Sebi148g00004 499 SUPERFAMILY Homeodomain-like 385 462 IPR009057 -
Sebi148g00004 499 Gene3D - 334 409 - -
Sebi148g00004 499 MobiDBLite consensus disorder prediction 1 230 - -
Sebi148g00004 499 Gene3D - 295 333 - -
Sebi148g00004 499 PANTHER GB|AAC33480.1 55 292 - -
Sebi148g00004 499 CDD SANT 343 405 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi148g00004 Sebi-Chr148 126602 128410 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi148g00004 294 489 MYB Transcription Factor Family AT3G09370 24.242 7.07e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi148g00004 Myb_DNA-bind_6 1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi148g00004 - - gsj:114382741 568.54