Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi147g00151 ATGGTGGTTTCCATGTTGCTGATCGCATTGGTCACCATCGCTGTTGTTGCCAACATGGACGGTTCCAAACAAGGAGCAGGAACTATGAAGACCCTTCTCTCTGTTTGTGGAAAAACAGAGGAACCAGAAAGTTGTGTCCATGTCTTAAAAAATGTTGGTGAAAGAGCCACAGTTTTGGATTATGTTAAAGCTTCTATCAATGCAACCCTCGAAGAAATGCTGGTTGTGAACATGCCTAAACCTTATCTTGAAAAGAGCCTCACACCTCTACAGCAAATGTCATATAGAGATTGTTTGGAACTCTTAATTTTGGGAAAGGAAGAACTAGAATCCTTGTATACAATGATTACAAATTCGTTTGCTAACATGTCCATAATAGACCCTGATGATGTTATCAACAGCCTAAGTGCTGTCATTTCATACCAACAAACTTGTTCTGATTTGTTAATGAGAACAAACAGCTATGAAATTTTGGGGTATTCATTGAAAATACCAATTATGGTTACAAGAATAACCTTAGCCATTGTTAATAATTTCAGTGAGTGGCCTAAAAATGGGGACCACAAGCAGAATGAAATTCCAACATTGTTTTCCGGAGCAGAGCGCCAATTGATAGAGTTTCAAAGAAATGTTGGTGATAAGCAGCCATATGCAGTTGTGGCACAAGATGGAAGTAGCCAATTCTCAACCATTTCTGAGTCACTCAATGCATGCTCAAAGAATAACCAGAGTCCTTGTATTATTTACGTTAAAAAGGGTAAATATGAGGAAAGAGTGGTGGTTCCTAAGGATCTAAAGCAAGTTGTCATGTATGGTGATGGCCCTGATAATACCATTGTCAGTGGAATCACCACAAGAGACCCCAACATGGTTACAACCACTCTCCGGGCAGCTACTTTTGTGGTATTGGGGAAAGGGTTTATATGCAAAAATATGGGTTTCACTGCTCCAGCTGCTATTATAGGAGCACCAGCACTTCTTGTCTTTGCTGATCATGCAGCATTCTTCAACTGCAAAATAGATGGTGAGGAAGGGAGCCTCTATGCAGTGGCCCAACGCCAATTCTACAGAGATTGTGAGATTCATGGGAGTGTGGACATCATCAAAGGAGACTCTGCAACTCTAATTCAGAACTCACAAATCATTGTGAAGCCTAGAAATTCTTCTCATTCTGTTTTAAGCAAAAATGTGGTAACTGCTCAATCAAGGTTGGACAAGTATGAAAGAACTGGTTTTGTGATTCAAAACTGCAGCATCACAGCACAAGGGGAAGGTGGCAATAGTCTTGTTGCTACAACTTATTTGGGCACCCCATGTAATGAATATTCAAGAACAATCATAATGGAATCATTTTTAGGAGATGTGATAAATCCAGAAGGGTGGTGCAAATGGAGTGACAACTATGGCATTGAAACAGCAACATTCCGTGAGTTTAATAACAGAGGGCCTGCTGCAAAAACTATTACGAGGGTCAATTGGGACAGCTACCGAACAATCATTCAGAGAAGTGAAATGGCGAGTTTCACAGCTACTCAATTTCTTGAATCAGAAAAATGGTTGCAAAGTTCAGGAATTCCGTACGATTATGGATTTGTTTACCATAAGGAAAATGATGAGTATACACAACATGGGGCTGTGCGCAACCATGGATAG 1653 0.4029 MVVSMLLIALVTIAVVANMDGSKQGAGTMKTLLSVCGKTEEPESCVHVLKNVGERATVLDYVKASINATLEEMLVVNMPKPYLEKSLTPLQQMSYRDCLELLILGKEELESLYTMITNSFANMSIIDPDDVINSLSAVISYQQTCSDLLMRTNSYEILGYSLKIPIMVTRITLAIVNNFSEWPKNGDHKQNEIPTLFSGAERQLIEFQRNVGDKQPYAVVAQDGSSQFSTISESLNACSKNNQSPCIIYVKKGKYEERVVVPKDLKQVVMYGDGPDNTIVSGITTRDPNMVTTTLRAATFVVLGKGFICKNMGFTAPAAIIGAPALLVFADHAAFFNCKIDGEEGSLYAVAQRQFYRDCEIHGSVDIIKGDSATLIQNSQIIVKPRNSSHSVLSKNVVTAQSRLDKYERTGFVIQNCSITAQGEGGNSLVATTYLGTPCNEYSRTIIMESFLGDVINPEGWCKWSDNYGIETATFREFNNRGPAAKTITRVNWDSYRTIIQRSEMASFTATQFLESEKWLQSSGIPYDYGFVYHKENDEYTQHGAVRNHG 550
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi147g00151 550 SUPERFAMILY Pectin lyase-like 217 530 IPR011050 -
Sebi147g00151 550 FunFam Pectinesterase 4 214 531 - -
Sebi147g00151 550 SMART PMEI_2 27 175 IPR006501 GO:0004857
Sebi147g00151 550 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 180 IPR035513 -
Sebi147g00151 550 Gene3D - 212 531 IPR012334 -
Sebi147g00151 550 Pfam Plant invertase/pectin methylesterase inhibitor 34 150 IPR006501 GO:0004857
Sebi147g00151 550 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 179 IPR035513 -
Sebi147g00151 550 Pfam Pectinesterase 218 516 IPR000070 GO:0030599|GO:0042545
Sebi147g00151 550 PANTHER PECTINESTERASE 11 521 - -
Sebi147g00151 550 CDD PMEI-like_3 34 180 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi147g00151 Sebi-Chr147 1760997 1762958 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi147g00151 2 532 Carbohydrate Esterase AT3G05610 33.099 6.33e-85 275
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi147g00151 K01051 - gmx:102665007 691.804