Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi147g00150 ATGGGCGGAGGTGGAGCGACACCTAACACAGAGGCACAGTACTCGACGGCGAAGATATCGGTGTGGTGGGATATAGAGAACTGTCATGTCCCCAAGGGTTCGGATCCCCATGCCATCGCACAGAATATTAGTTCAGCACTGGTTCGCATGAACTACTGTGGCCCCGTTTCCATCTCCGCCTACGGCGACACCACTCGCATCCCCGCCTCTGTACAGCACGCCCTTTCCAGCACCGGAATCTCCCTCAATCATGTTCCTGCCGGTGTGAAAGACGCAAGCGACAAGAAAATCCTTGTCGACATGCTGTTCTGGGCAGTGGACAATCCTGCACCTGCTAATTACTTACTAATTTCGGGTGATCGAGACTTCTCTAACGCTCTCCATCAACTGCGGATGAGGAGATATAATATTCTACTTGCACAACCTCAGAAAGCATCTGCACCCCTAGTTGCAGCTGCTAAGAGTGTATGGCTTTGGACTACTCTCTTAGCTGGAGGAACTCCTTTAACTAATGGTGAATCACAACTTGGTAATAATGGCCTCTTATCATCTTCTGACACCTTACAAATTCCAGTCACAAATGCTGCTCAGATACAGCAGCAAGTGGATTCCTATTCTGAAGTTCAAAATGCCGCACATGGAAATTCAAAATTTCCAAATGGAGGAAGGGGATTTGATTCTAGATATCAGGGAAAATCAACTTGGAGGAACCCAAGTCAACCAAATGGACCCAAACCAATGAATCCACCACCAGTTGGATTTCAAGATAATCATAATAACATAAACTCTTATCGACCTGGCAGCTATAATCCAAATGTTCCTCTAAGCGGACCTGCTACAAATTATGTTCGTGGCAATACTGATCAGTTATGGAGCAATAATGGTAATCTACAGGGCAATCATCAACATCCTTATTCCCAGCCATTAAGGCCAAACAATTTTCCGTTGCAACCTCCTTTTGCACCTAGTAATACATATGCTCCAAATTCCCGTAATTTTGCAACTTCACCGGTGCCACCTAGGACTGGTGGTCCCAACTTCATTACAGGACCACTCACAAATGGGCCAGATATTGGTAATCTGAACATTTCTGGATATCCAAATACTGTTCATAATCCGCGTACCACTCTGCAACGGAGTGGAGAGTTGAAACCAAATCACAACAGTAATGCTCCGCCTCCTGTAAGATCAACTGATGATAAAAATCAACCTACACCATTGACAGCAACGGGTAATAATAACCCTCCTGCTAATGGTATGTGGGGATCTCCAGGATGTCCTAAACCTTCCGAATTTGTACAAGGCCTTATAGGAGTTGTTTTACTTGCTTTGAACTCGCTAAAAAATGCAAAGATGATGCCAACTGAGGCAAATATAACTGATTGCATCCGTTATGGAGATCCTAAGCACCGCAACACTGATGTTAAGAAGGCTCTTGAGTGTGCTATTGAACAGCAGATGGTGGTGAAACAGAATTTAGGCGCTTTGCCTTTGTATGTTGGTAAGAATGATAAACTTTGGAAGTGTGTAAATCCTTTAGGTGGGAATCCTAAGCAGCACTCAAAAGAAACATGGGATGAAATTCAAAATTTTTTAACAACTTCTGCTGGAAGATCGGCAATAATGGCTACACAGTGCAAGTATGAAGCAGGTATTGTGATAAAGAACATGTGCTTTAAAAATCATGCTTTGGGTGATGTCCTTCAGATACTGAACATGTTGATTACCCATAAAAAATGGATTGTGCATCATCAGTCTGGCTGGCAACCACTTATCATTACTCTTCCTGAGACAAACCCTGATTCAGGGGTTGTAGCTGGCACATAA 1827 0.4384 MGGGGATPNTEAQYSTAKISVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSISAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTTLLAGGTPLTNGESQLGNNGLLSSSDTLQIPVTNAAQIQQQVDSYSEVQNAAHGNSKFPNGGRGFDSRYQGKSTWRNPSQPNGPKPMNPPPVGFQDNHNNINSYRPGSYNPNVPLSGPATNYVRGNTDQLWSNNGNLQGNHQHPYSQPLRPNNFPLQPPFAPSNTYAPNSRNFATSPVPPRTGGPNFITGPLTNGPDIGNLNISGYPNTVHNPRTTLQRSGELKPNHNSNAPPPVRSTDDKNQPTPLTATGNNNPPANGMWGSPGCPKPSEFVQGLIGVVLLALNSLKNAKMMPTEANITDCIRYGDPKHRNTDVKKALECAIEQQMVVKQNLGALPLYVGKNDKLWKCVNPLGGNPKQHSKETWDEIQNFLTTSAGRSAIMATQCKYEAGIVIKNMCFKNHALGDVLQILNMLITHKKWIVHHQSGWQPLIITLPETNPDSGVVAGT 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi147g00150 608 PANTHER LIMKAIN B LKAP 14 490 IPR024768 GO:0005777|GO:0010468
Sebi147g00150 608 Pfam NYN domain 18 154 IPR021139 GO:0004540
Sebi147g00150 608 MobiDBLite consensus disorder prediction 347 415 - -
Sebi147g00150 608 MobiDBLite consensus disorder prediction 331 415 - -
Sebi147g00150 608 CDD PIN_limkain_b1_N_like 18 142 - -
Sebi147g00150 608 Pfam OST-HTH Associated domain 545 593 IPR025677 -
Sebi147g00150 608 Gene3D - 10 161 - -
Sebi147g00150 608 MobiDBLite consensus disorder prediction 206 306 - -
Sebi147g00150 608 MobiDBLite consensus disorder prediction 253 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi147g00150 Sebi-Chr147 1752024 1754604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi147g00150 11 197 C2H2 Transcription Factor Family AT5G61190 71.579 1.54e-83 280