Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi147g00147 ATGGGTTCTAATCTTAATGCTGAATTATCCAAGAAAACTAGCATTTTTAATCTCAAGGTTTGGGAAATAATTGCAATTGCTGTTGGATTGACCATTATAATTATCCTCTCTGTGCTATCACTTTGCCTTACTTCAAGGAAGAAATCTAGAAAAGCCAAGGACAGAATTCCTGTTAGTCAGATACCAACTGTATCAAAGGAAATCAAGGAAGTGAGGGTTGAGCAAGTATCAACAAATGGATTTGCTCCTCGTGATGGAATATTGCTTACCATTCATGATAAGTCCAGTGACAAGGAATCAGACAAAGTCATGGTTCATTTAGGTGTGGGGAAGATGATGAATGGGGATAGCAGCAGTCATTCTGATTCTTTTCAGCACATGGAGAAAGATGGAGGTGGTTCACTCTCACAGTCAGGAGAAGAAGGTAGCTCTGGCACAGTTGCAGTGTACAAGCACTCTTCTTCATACCCTATAACAGCTCCTTCACCTCTGAATGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACCTTGAGGGATCTTGAACTTGCCACAAATCGTTTTGCCAAAGAAAATGTCCTTGGTGAAGGTGGGTATGGAGTTGTTTATAGGGGACAATTGATCAATGGGACTCCAGTGGCAGTTAAAAAGATACTCAATAATATCGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTCCGACACAAAAACTTGGTTCGCCTTTTGGGTTACTGCATTGAGGGAACTCACAGGATGTTAGTCTATGAGTATGTCAATAATGGAAACTTGGAGCAATGGCTTCACGGAGCTATGCGTCACCATGGATATCTTACCTGGGAAGCGCGAATCAAGATTCTCCTTGGCACAGCGAAAGCGCTTGCATATTTGCATGAAGCAATAGAGCCGAAAGTGGTACACCGGGATATCAAGTCAAGCAACATATTAATTGACGATGACTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTATTGGGTGCTGGGAAGAGTCATGTCACAACGCGAGTTATGGGTACCTTCGGTACTAAAGAAAAGCGAATCATTGGGGCATGA 1104 0.4266 MGSNLNAELSKKTSIFNLKVWEIIAIAVGLTIIIILSVLSLCLTSRKKSRKAKDRIPVSQIPTVSKEIKEVRVEQVSTNGFAPRDGILLTIHDKSSDKESDKVMVHLGVGKMMNGDSSSHSDSFQHMEKDGGGSLSQSGEEGSSGTVAVYKHSSSYPITAPSPLNGLPEFSHLGWGHWFTLRDLELATNRFAKENVLGEGGYGVVYRGQLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGTKEKRIIGA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi147g00147 367 MobiDBLite consensus disorder prediction 115 145 - -
Sebi147g00147 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Sebi147g00147 367 ProSitePatterns Protein kinases ATP-binding region signature. 197 220 IPR017441 GO:0005524
Sebi147g00147 367 SMART serkin_6 191 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi147g00147 367 Pfam Protein kinase domain 192 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi147g00147 367 Gene3D Transferase(Phosphotransferase) domain 1 267 361 - -
Sebi147g00147 367 FunFam Putative receptor-like protein kinase 173 266 - -
Sebi147g00147 367 FunFam Os07g0541700 protein 267 356 - -
Sebi147g00147 367 MobiDBLite consensus disorder prediction 130 145 - -
Sebi147g00147 367 PANTHER OS01G0323000 PROTEIN 4 358 - -
Sebi147g00147 367 ProSiteProfiles Protein kinase domain profile. 191 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi147g00147 367 SUPERFAMILY Protein kinase-like (PK-like) 165 357 IPR011009 -
Sebi147g00147 367 Gene3D Phosphorylase Kinase; domain 1 172 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi147g00147 Sebi-Chr147 1697307 1699334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi147g00147 165 358 Trihelix Transcription Factor Family AT1G23540 51.282 4.95e-64 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Sebi147g00147 Pkinase 1.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi147g00147 - - gmx:100787014 639.802