Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi147g00124 ATGGCGTCTCTGCAAACAAACGTCGATTCCAGTAATTCACAACGATCCAATCATAAGAAGCGCCGGAAAATCACCGCTGATCGCAATTCCCTCACTCTCATTCCTTGGAGATCCCAAACCAAGCAGCGGATCTACACCTCCAACCTCGTCGACGCTCTCCGCCGTAGCCGTTCGCCGCCGTCCAAGCCTATTTCCGGCCGCGAAGTTCGCGTGGCCGCCGACCGGATTCTGGCTGCCACAGCCAGGGGACGAACTCAGTGGAGCCGTGCGATTCTGGCGAGTCCGATCAGACGTTGGAAGCTCCAGTTGCACAAGAAGGTGAAGAAGGCTGCGAACGGATTGATGAAGAAGAGGAACCCGGAGATTCGGAGAAGGTTGCCGGCGGTGCAGAGGAAAGCGCGCGTTCTGAGTCGGTTAGTCCCTGGTTGCCGTAAGGTCTCGTTCCCGAATCTTCTGGAAGAAGCAACTGACTATATTTCGGCGTTGGAGATGCAAGTGCGGGCCATGACGGCTCTCACCGAGCTTCTCGCCGGTGGTGTGCCGCCGCCGCCGGCTCGGCTCGAGTTGAGTTGA 573 0.5794 MASLQTNVDSSNSQRSNHKKRRKITADRNSLTLIPWRSQTKQRIYTSNLVDALRRSRSPPSKPISGREVRVAADRILAATARGRTQWSRAILASPIRRWKLQLHKKVKKAANGLMKKRNPEIRRRLPAVQRKARVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTALTELLAGGVPPPPARLELS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi147g00124 190 CDD bHLH_AtIBH1_like 123 173 IPR044549 GO:0006355
Sebi147g00124 190 MobiDBLite consensus disorder prediction 1 26 - -
Sebi147g00124 190 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 113 162 IPR011598 GO:0046983
Sebi147g00124 190 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 123 185 IPR036638 GO:0046983
Sebi147g00124 190 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 37 176 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi147g00124 Sebi-Chr147 1508488 1509060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi147g00124 29 169 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 53.289 2.00e-40 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi147g00124 - - gmx:100783462 209.534