Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi147g00119 ATGCCACCTAGTCCCATAGATGTCACCAATCTCACCAAAACTGTTCAAGACATTAGATCCCATCTTATAAGGCTATGTGGTGAAGCTGAGGGCTATTTGGAGACCCATTACTCTTCCATCTTAGGCTCTTACCATGACAATCCCCTTGACCATCTCCATATTTTCCCTTACTATTCCAATTACCTCAAACTTGCTCTCCTTGAATTCACTATCTTAACCCAACACTGCACACATGTCCCTAACAAAATTGCCTTTGTGGGTTCAGGACCTCTTCCTCTTACCTCAATTGTCTTGGCATCCAATCACTTACCTTCCACCACTTTCCACAACTATGACATCGACCCTTCAGCCAATTCAAGTGCCCTGCGTTTGGTTTCCTCTGACCCTGACTTGTCAAAAAGAATGGTTTTTCACACCAATGATATCTTGGATGTGTCAAATGAATTGAAAGAGTATGAAGTTGTTTACTTGGCAGCACTTGTGGGTATGGACAAGGAAGAAAAGAATAAAATCATTGATCACTTGGCTAAACATATGGCCCCAGGTGCTCTTTTGATGCTAAGGAGTGCTCATGGGGCTAGAGCTTTTCTCTATCCTGTGGTTGATCCTTGTGATCTTCAAGGCTTTGAGGTCCTCTCTGTGTTTCATCCAACTGATGAGGTTATCAATTCAGTTGTCATAGCACGTAAATATCCTATGCCTATACACTCTCTTGAGCAAGGCCTTGGTTCTATCATCCTACCAAATAAATGCTCTGAGATTCAAGTCTTCAACCATGGGAATATGATTGAGGAATTGACAATTGAGGAGCAACTCTCATAA 822 0.4209 MPPSPIDVTNLTKTVQDIRSHLIRLCGEAEGYLETHYSSILGSYHDNPLDHLHIFPYYSNYLKLALLEFTILTQHCTHVPNKIAFVGSGPLPLTSIVLASNHLPSTTFHNYDIDPSANSSALRLVSSDPDLSKRMVFHTNDILDVSNELKEYEVVYLAALVGMDKEEKNKIIDHLAKHMAPGALLMLRSAHGARAFLYPVVDPCDLQGFEVLSVFHPTDEVINSVVIARKYPMPIHSLEQGLGSIILPNKCSEIQVFNHGNMIEELTIEEQLS 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi147g00119 273 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 235 IPR004298 GO:0030410|GO:0030418
Sebi147g00119 273 Gene3D Vaccinia Virus protein VP39 6 232 IPR029063 -
Sebi147g00119 273 PANTHER NICOTIANAMINE SYNTHASE 3 1 266 IPR004298 GO:0030410|GO:0030418
Sebi147g00119 273 Pfam Nicotianamine synthase protein 1 232 IPR004298 GO:0030410|GO:0030418
Sebi147g00119 273 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 82 232 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi147g00119 Sebi-Chr147 1428244 1429065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi147g00119 6 270 Nicotianamine Synthase Gene Family AT5G04950 63.971 1.09e-122 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi147g00119 K05953 - gmx:100794250 464.536