Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi147g00113 ATGGAGATGGAGAAAAGGCGTTCCAAGGGAAGCTTCCTCAGCTTGTTTGATTGGAATGCCAAATCTCGAAAAAAGCTGCTTTGGAACAATGCTACCTTACCTGAGGTTTCAAAGCAAGGAAAGGAAAATGTGGAGACCTTGTCAGAGTCACAGCTCAGTAGGATGAAGGTGGATGAAAATGGAGCAAGTCCAAATAATATTGCAAGTTGTGATTTTAACTGTTCCCTATCAATTTATAGTGATGAAGGATGTGGGAGTAAAGCCCCTGGGTTAGTAGCTAGGCTAATGGGTTTGGATTCGATGCCAGCTTCGGCAGACACTGAGCTGGCCTGCACTTCATTGTATAGCTCCAACTCTCTTGGAGCTTCTCATTGTAATGAGGGTCCTCTTCATTCAATGGATGACTTTCACCGTGTGGACTACGTAAACACACCACTTAAGCTGCAGAAGTTTTCTCGGGATGCCATGGAATCAAGGGCACAGAAAATGGAAAACCGGCCGATAAAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCAGCTAAACCCATTCCAGTTACTCACAATAGAATGTTGTCTCCTATCAAGAGTCCTGGTTTTCTGCCACCAAAGAATGCGGCTCACTTAATGGAGGCAGCTGCTAAGATAAGTGAGTCAAACCCTCGGCCATATACGAGGGATAGAATGCCATCAGTTAGGCCTTCATCTGTTCCCTTGAGAATTCTTGATTTAAAAGAGAGATTGGAAGCTGCACATTATGCATCCATGCCTAAAAAGCTTGTGGATCCAAGCAATACCAACTCTGCAAATGGAAATCTTAATGAGAGGAGTAGCAGTTTGTATAAATGCACTTCGGCGTTCAAAGGTTCAAGAGATTCAGACAAAAATAGATCTTCCCATTTAGCAAGTAAAGGAAAATCAGCTTCACTTGCAGTCCAAGCCAAAACCAATGTTCAAAACAGAGATACATTGGTTTCAAATGGTGATAGGAAATATATGAAGCAGAAAGAACAGAATGAGATAAAGTCAAACCAGCTCCCAAGGAACCAGAAACCAAGGTCAAACCGATCCATGCAGCAGAGAACTTGCACAAGCCGGAATGGTGGTGTGCTTAGGCAGAATACTCAAAAGCAAAATAGCATGACCAGCAAAGGCAAATCAACTTTGAAAGTAGATTCCAATAAGCCAATGACGCAAGCTTTGTCTTCAGAAAGTTCTACTGGAATTAGGAAGACAAGAAACAAGGTTGCTATAAATGCCAATATTCAGCCTAAAAGGTCAAGCTCTAGGGCAACTGATAACCAAAAGGAGTTTCTGCCATCCAAAACAGAGAGTGTTTCCCAAAAGAAAAAGTATGTAAGAAGAGATGTCCATGAGGCAAGAGGGCCTGATAATGCAGTGAATAATTTTCAAAGTAAGTCCATAAAATGCAATTTTACAACTGATGGAAGTATTGATCAGGATGCATTTAACATGAAAGAAAGCAAGGATGTTATTTCATTTACATTTACATCTCCCTTGAGGAGAAGCATGCCTGAGTCACCCATCTCTACTGAGCAAGCTATGGGAACCAGAAACATAATTGGAGTCAACTCTCTCGGGCATAGTGATAATCTTTATCCCATAAATTTATCATCATCTCCGCCAGGGTTAAATATGATAGATGGTGATGCTTTAAATGTCCTGTTGGAGAAAAAGCTGCAAGAATTGGCATCTAGACTCAACTTGCCTCAAGGTATCCTGGCTACAGAGGGATCTTCTACTGGTTTGAGATCTAGTTTGCAAGACAAAGTTCCCAGCATGGTTAGCACCACATCTAAGGAACAAGACAAAAACTTTCACCCTGACCTGTTTGGTGACAAAGTGGATGGCATGCATAACTATCGTTGTTGTTCTAGTGAAGATCCGGTGTTTAACATGAATCGGCAACTTCGGACATCAGAAGTAAGGGAAGATCCTAGCTGTAGCAGTAACAGTGAAAGAGGAAATGATCTAGGATGTCAGCATTCCAGTGCAGTTACAGTTTTTGAAACTCCGTCTGTTAGTGAAAGTTACTTGGATAGTGAAGACAGTAGTACATATGGCAGCACAGTTTATTCTTCTATGCAAGATGAAGAAGTATCTAATTTTTCCCAGATAAACGAATCTGTATCACTTGAAAATGGGGTGAAATGGTTGGAGCAAAGCCCTTCCACATCAGATATACTTGGCAATGCAGAGTTTATGGCAGAAGAATTTGTCATGGGCCAAACTGATACGGTCATGATGCCAAATCTCTTTGATCTTTTGGAGAATCAGGGTAATGGAACAGAAAACTATGAGGAAGAGTGCTCTAAGCTGGAAAGGAAGGTTTTATTTGACTGTGTGAGTGAGTGCCTAGAGTTGAGATGTAAGCAAGCTTTTGTTGGAAGTTGCAAAGCATGGCCTAGATGGGTAACATCAGTTCAGAGGAAGAGCTGTTTGGCAGAAGAATTGTACAAGGAGATTCTGGGTTTTAGAAGCATGGAAGAGGTAATGATGGATGAGCTTGTCAGCAAGGACATGAGCACTGGATGCGGGAAATGGCTTGACTTTGATGTTGAAGCATTTGAAGAGGGTTTAGAGGTTGAGCGGCACATACTAGCTTATCTGATTAATGAATTGGTTTCTGATTTATTACTTGTCTAA 2667 0.4143 MEMEKRRSKGSFLSLFDWNAKSRKKLLWNNATLPEVSKQGKENVETLSESQLSRMKVDENGASPNNIASCDFNCSLSIYSDEGCGSKAPGLVARLMGLDSMPASADTELACTSLYSSNSLGASHCNEGPLHSMDDFHRVDYVNTPLKLQKFSRDAMESRAQKMENRPIKRFQTEMLPPKSAKPIPVTHNRMLSPIKSPGFLPPKNAAHLMEAAAKISESNPRPYTRDRMPSVRPSSVPLRILDLKERLEAAHYASMPKKLVDPSNTNSANGNLNERSSSLYKCTSAFKGSRDSDKNRSSHLASKGKSASLAVQAKTNVQNRDTLVSNGDRKYMKQKEQNEIKSNQLPRNQKPRSNRSMQQRTCTSRNGGVLRQNTQKQNSMTSKGKSTLKVDSNKPMTQALSSESSTGIRKTRNKVAINANIQPKRSSSRATDNQKEFLPSKTESVSQKKKYVRRDVHEARGPDNAVNNFQSKSIKCNFTTDGSIDQDAFNMKESKDVISFTFTSPLRRSMPESPISTEQAMGTRNIIGVNSLGHSDNLYPINLSSSPPGLNMIDGDALNVLLEKKLQELASRLNLPQGILATEGSSTGLRSSLQDKVPSMVSTTSKEQDKNFHPDLFGDKVDGMHNYRCCSSEDPVFNMNRQLRTSEVREDPSCSSNSERGNDLGCQHSSAVTVFETPSVSESYLDSEDSSTYGSTVYSSMQDEEVSNFSQINESVSLENGVKWLEQSPSTSDILGNAEFMAEEFVMGQTDTVMMPNLFDLLENQGNGTENYEEECSKLERKVLFDCVSECLELRCKQAFVGSCKAWPRWVTSVQRKSCLAEELYKEILGFRSMEEVMMDELVSKDMSTGCGKWLDFDVEAFEEGLEVERHILAYLINELVSDLLLV 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi147g00113 888 MobiDBLite consensus disorder prediction 287 455 - -
Sebi147g00113 888 Pfam DUF761-associated sequence motif 80 104 IPR032795 -
Sebi147g00113 888 Pfam Domain of unknown function (DUF4378) 733 880 IPR025486 -
Sebi147g00113 888 Coils Coil 763 783 - -
Sebi147g00113 888 MobiDBLite consensus disorder prediction 302 326 - -
Sebi147g00113 888 MobiDBLite consensus disorder prediction 339 442 - -
Sebi147g00113 888 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 884 - -
Sebi147g00113 888 MobiDBLite consensus disorder prediction 647 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi147g00113 Sebi-Chr147 1378198 1381825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi147g00113 3 886 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.769 1.30e-103 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi147g00113 - - gmx:102663635 1257.66