Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi147g00109 ATGTGTGAAATGGGAGTGGCACAGCGGTGTAATTTTTCCACTTCAAGTGTCATTTCCGTAATTTCCTTTAGTGCCACGAAAATATCTAGCCATCTCTTCACCGGACCAACATCTCTCGAAGTTTTCTTCCAATATATCTATCTCCAACAAAGGCTTGAAGCTCTGGCGTTAGATTTTTGGGCGAGTTGGGGGCTTCTGTGGCTTGATGGATCGGGAAGAGGAGGATCCAACGGCGGATCTTGCTACTACTCTGTTCTCGGGATTCGCAGGGACGCCTCCTCCTCTGATATTCGCACTGCTTACCGCAAGCTTGCTATGAAGAAGTGGCACCCGGACAAATGGGCTCGGAACCCTGCAACTGCTGGAGAAGCAAAGCGGCGCTTTCAGCAAATCCAGGAAGCTTACTCAGTTCTCTCTGATGAGTCTAAGAGGTCAATGTACGATGCTGGGCTTTATGATCCCTTAGAGGAAGATGACCAAGTCCGTATCGTTTCCTTTCAATTTGATTTGCAGTTGCTTTTTGCCGAATTCTGTGATTTTATGCATGAAATGATCTCTATGATGAACAATGTCAAAGATGAGGGGGACAGCTTGGAGGACCTACAAAGGATGTTCGTGGAGATGGTTGGTGATGATGGGATGAGCTTTGACTTGAACCAGGATCAGACGTCTGGTAAGAGGAGTACGAGTCAATGGATCAAGAGGTAA 708 0.4689 MCEMGVAQRCNFSTSSVISVISFSATKISSHLFTGPTSLEVFFQYIYLQQRLEALALDFWASWGLLWLDGSGRGGSNGGSCYYSVLGIRRDASSSDIRTAYRKLAMKKWHPDKWARNPATAGEAKRRFQQIQEAYSVLSDESKRSMYDAGLYDPLEEDDQVRIVSFQFDLQLLFAEFCDFMHEMISMMNNVKDEGDSLEDLQRMFVEMVGDDGMSFDLNQDQTSGKRSTSQWIKR 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi147g00109 235 Gene3D DnaJ domain 72 167 IPR036869 -
Sebi147g00109 235 PRINTS DnaJ domain signature 83 101 IPR001623 -
Sebi147g00109 235 PRINTS DnaJ domain signature 102 117 IPR001623 -
Sebi147g00109 235 PRINTS DnaJ domain signature 123 143 IPR001623 -
Sebi147g00109 235 ProSitePatterns Nt-dnaJ domain signature. 128 147 IPR018253 -
Sebi147g00109 235 MobiDBLite consensus disorder prediction 216 235 - -
Sebi147g00109 235 SUPERFAMILY Chaperone J-domain 81 175 IPR036869 -
Sebi147g00109 235 SMART dnaj_3 80 143 IPR001623 -
Sebi147g00109 235 ProSiteProfiles dnaJ domain profile. 81 151 IPR001623 -
Sebi147g00109 235 PANTHER PUTATIVE, EXPRESSED-RELATED 77 229 - -
Sebi147g00109 235 Pfam DnaJ domain 82 148 IPR001623 -
Sebi147g00109 235 CDD DnaJ 81 140 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi147g00109 Sebi-Chr147 1335100 1336629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi147g00109 81 149 C2H2 Transcription Factor Family AT1G74250 42.857 9.90e-12 62.4