Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi147g00094 ATGGCATTTGTTAATTTCCTTTTCATTCTCCTGCTTTTACCCTCCTCATTTGAGGCTTTCTCAGATGAAATTCCCTCTGATATCCAAACCCAAGACATGCATGCCTTGATTGCACAAGCCTGCATGGACATTGAGAACCAAAACACATGCCTCACAAACATTCAAAATGAGCTCACCAAAATTGGCCCACCAAGCCCCACTTCAGTCATAAGTGCTGCACTCAGGACCACACTCAATGAAGCCCAAAGTGCAATTAACAACATAACAAGATTCAGCACATTCTCTGTCAGTAACAGGGAACAAATAGCCATAGAAGATTGCAAGGAGCTTCTTGATTTCTCTGTGTCTGAGCTGGCATGGTCATTAGGTGAAATGAGGAGAATCAGAGCAGGGGACAAAAGCGTGCAATATGAAGGAAACCTTGAAGCTTGGTTAAGTGCAGCTCTTAGCAACCAAGACACGTGTCTTGAAGGATTTGAAGGCACTGATAGACGCCTTGAGAGCTACATTAGTGGAAGCTTAACACAAGTCACACAGCTTATAAGCAATGTTCTGTCTCTATACACTCAATTGCATAACTTACCCTTCAGGCCTCCAAGGAACACCACCACTACTACTCTTGTAACAAGTGATGAAGAACAACAAAGCTTGGATTTGGAGTTTCCTGAATGGATGACAGAGGGTGATCAAGAGCTCCTTAAATCCAAGCCACGTGGCATTCGTGCAGATGCTGTTGTGGCATTGGATGGAAGTGGTCACTACAGAACAATCACAGATGCTGTTAATGCAGCTCCAAGTCATAGCATCAGGAGATATATTATATACGTGAAGAAAGGACTTTATAAGGAAAATGTAGATATGAAGAAGAAAATGACCAACATCATGCTCGTAGGTGATGGTATTGGCCAAACCATTATCACAAGCAATCGCAATTTCATGCAAGGATGGACCACTTTTCGAACTGCCACTCTTGCTGTATCTGGGAAGGGTTTCATTGCAAGGGACATGACATTTCGCAACACTGCTGGACCAGTGAATCATCAAGCTGTGGCACTGCGTGTGGATTCAGATCAATCTGCTTTCTATAGGTGCAGTGTGGAAGGGCACCAAGATACTCTTTATGCACACTCACTGAGACAATTTTACCGTGAGTGCGAAATTTATGGTACCATAGACTTTATTTTTGGCAATGGGGCTGCTGTGTTGCAAAATTGCAAGATATACACTAGAGTTCCACTTCCCTTGCAGAAGGTTACTATCACAGCCCAAGGAAGAAAAAGCCCACATCAGAGCACTGGGTTTACAATCCAGGATAGTTATGTTTTGGCTACCCAACCCACATATTTGGGGAGGCCGTGGAAGCAATACTCTAGAACAGTTTACATTAACACATACATGAGTGCAATGGTTCAACCACGAGGGTGGCTTGAGTGGCTTGGAAACTTTGCCTTGGACACATTGTGGTACGGTGAGTACAGGAATTATGGGCCTGGTTCATCTCTTGCGGGTAGGGTCAAATGGCCCGGTTATCATATCATGAAAGATGCTGGTACCGCTAGTTTCTTCACGGTTCAACGATTCATTAATGGTGACTCATGGTTGCCGGGAACAGGCGTCAAGTTCACATCAGGCTTGACCAATTGA 1644 0.441 MAFVNFLFILLLLPSSFEAFSDEIPSDIQTQDMHALIAQACMDIENQNTCLTNIQNELTKIGPPSPTSVISAALRTTLNEAQSAINNITRFSTFSVSNREQIAIEDCKELLDFSVSELAWSLGEMRRIRAGDKSVQYEGNLEAWLSAALSNQDTCLEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLHNLPFRPPRNTTTTTLVTSDEEQQSLDLEFPEWMTEGDQELLKSKPRGIRADAVVALDGSGHYRTITDAVNAAPSHSIRRYIIYVKKGLYKENVDMKKKMTNIMLVGDGIGQTIITSNRNFMQGWTTFRTATLAVSGKGFIARDMTFRNTAGPVNHQAVALRVDSDQSAFYRCSVEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSYVLATQPTYLGRPWKQYSRTVYINTYMSAMVQPRGWLEWLGNFALDTLWYGEYRNYGPGSSLAGRVKWPGYHIMKDAGTASFFTVQRFINGDSWLPGTGVKFTSGLTN 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi147g00094 547 SMART PMEI_2 32 187 IPR006501 GO:0004857
Sebi147g00094 547 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 192 IPR035513 -
Sebi147g00094 547 CDD PMEI-like_4 49 191 - -
Sebi147g00094 547 Pfam Pectinesterase 243 531 IPR000070 GO:0030599|GO:0042545
Sebi147g00094 547 NCBIfam pectinesterase inhibitor domain 6 192 IPR006501 GO:0004857
Sebi147g00094 547 Gene3D - 238 545 IPR012334 -
Sebi147g00094 547 FunFam Pectinesterase 237 545 - -
Sebi147g00094 547 Pfam Plant invertase/pectin methylesterase inhibitor 36 187 IPR006501 GO:0004857
Sebi147g00094 547 PANTHER PECTINESTERASE 20 535 - -
Sebi147g00094 547 ProSitePatterns Pectinesterase signature 2. 387 396 IPR033131 -
Sebi147g00094 547 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 192 IPR035513 -
Sebi147g00094 547 FunFam Pectinesterase 34 193 - -
Sebi147g00094 547 SUPERFAMILY Pectin lyase-like 241 544 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi147g00094 Sebi-Chr147 1178144 1180519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi147g00094 1 547 Carbohydrate Esterase AT3G05620 61.649 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi147g00094 K01051 - gmx:100810565 941.799