Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi147g00087 ATGGAGGGAATGATGGACAAGGGGGTATTGGATGATGTGATAAGAAGGCTACTTGAAGGGAAAGGAGGAAAACAGGTTCAGCTTTCTGAGTCGGAGATCCGTCAACTCTGCGTCAACGCTCGACAAATCTTCCTCTCTCAGCCAATTCTCTTGGAGCTCCATGCTCCCATCCGCATCTGTGGTGATATACATGGTCAGTACCAAGACTTATTGAGGCTTTTTGAATATGGTGGCTACCCTCCTGCTGCAAACTACTTGTTTCTTGGGGATTATGTGGATAGAGGGAAGCAGAGTTTGGAGACTATATGTTTGCTTTTGGCCTACAAAATAAGATATCCAGACAAGATTTTTCTCTTGAGAGGGAACCATGAAGATGCAAAGATAAACCGAATTTATGGATTTTATGATGAATGTAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTTACAGACTGCTTTAACTGTTTGCCAGTAGCTGCACTCATTGATGACAAAATACTTTGTATGCATGGAGGACTCTCCCCAGAAATGCAGAACTTAGATCAGATAAGGGAGGTTACAAGACCTACTGAAATTCCGGATAGTGGTCTCCTATGTGATCTGCTTTGGTCTGATCCTGATTCTAGCATTGAGGGCTGGGCAGACAGTGATCGAGGCGTTTCATGTACTTTTGGACCTGATGTTGTCGCAGAGTTTTTGGATAAAAATGATCTTGATCTTGTCTGCAGAGGTCATCAGGTTGTGGAGGATGGATATGAGTTTTTTGCTAAACGAAGATTAGTCACAATATTTTCTGCACCAAACTATGGTGGGGAATTTGACAATGCTGGTGCATTGTTGAGCGTTGATGAGTCTCTTGTATGTTCCTTTGAGATATTGAAACCCATGGACAAAGGATCAGGAAGTGGTACATCAAAAATGAATCTTAAGAAGCCCCCTAAACTTGGAAAGACCTAG 960 0.4229 MEGMMDKGVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPILLELHAPIRICGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIFLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPEMQNLDQIREVTRPTEIPDSGLLCDLLWSDPDSSIEGWADSDRGVSCTFGPDVVAEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPMDKGSGSGTSKMNLKKPPKLGKT 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi147g00087 319 FunFam Serine/threonine-protein phosphatase 2 305 - -
Sebi147g00087 319 SUPERFAMILY Metallo-dependent phosphatases 15 298 IPR029052 -
Sebi147g00087 319 Pfam Serine-threonine protein phosphatase N-terminal domain 10 53 IPR031675 -
Sebi147g00087 319 CDD MPP_PP1_PPKL 9 296 - -
Sebi147g00087 319 MobiDBLite consensus disorder prediction 300 319 - -
Sebi147g00087 319 Pfam Calcineurin-like phosphoesterase 57 248 IPR004843 GO:0016787
Sebi147g00087 319 ProSitePatterns Serine/threonine specific protein phosphatases signature. 119 124 IPR006186 GO:0016787
Sebi147g00087 319 Gene3D - 4 303 IPR029052 -
Sebi147g00087 319 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 15 306 - -
Sebi147g00087 319 PRINTS Serine/threonine phosphatase family signature 56 83 IPR006186 GO:0016787
Sebi147g00087 319 PRINTS Serine/threonine phosphatase family signature 181 208 IPR006186 GO:0016787
Sebi147g00087 319 PRINTS Serine/threonine phosphatase family signature 238 258 IPR006186 GO:0016787
Sebi147g00087 319 PRINTS Serine/threonine phosphatase family signature 118 142 IPR006186 GO:0016787
Sebi147g00087 319 PRINTS Serine/threonine phosphatase family signature 152 178 IPR006186 GO:0016787
Sebi147g00087 319 PRINTS Serine/threonine phosphatase family signature 85 112 IPR006186 GO:0016787
Sebi147g00087 319 PRINTS Serine/threonine phosphatase family signature 260 276 IPR006186 GO:0016787
Sebi147g00087 319 SMART pp2a_7 28 298 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi147g00087 Sebi-Chr147 1123308 1125514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi147g00087 57 244 Calmodulin-binding Proteins AT5G63870 32.287 1.09e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi147g00087 K06269 - gmx:100805030 626.706