Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi147g00045 ATGGCCGCCGTCACCCTCCTTGCCCTAGGTAACGGTTCTCCCGACGTTTTCTCTTCCCTCGCCGCCCTCCGCGCCGGTCAATACCGAACCGGCTTCGGCGCCATACTCTCCGCCGGAGCCTTCGTCTCTGCTCTCGTCGTCGGCTTCGTCGCGATCTACGCCGCGCCTTTTCCAGTCGATCCCGCGCCTTTCGTGAGAGATGTCTTGTTCTACTTGACCGCCGCTTTGTTCCTCTTCTACGTCTATCTTAGTGCTGAGATTTTTCTATGGCAAGCACTTGGATTCGTTGGATTCTACATCTTCTTCGTTGGATTTGTGTTCTATATGGATTTAGGGATGCCGGATCGCAGGGAAAAGAGTTCTGTGGATCTTGAGGGGCAAGAGGAATCGGGTTTCGCCGTTAAAGCTGCGGAATCTCCCCAGGAAGATGAACGCACTTCTGGATTGTGTGCAGGTTTTCGTTTGATTTCTAAAGCATGGGAGCTTCCTGTCTCAACTCTCTTAAAATTGACAATCCCTCAACCAGCACCGTCGCAATGGAGCAGATTTTATGCATCAGCCAATATCGCTCTTTGTCCACTAGCCCTCTTGTATGCCTGCAACTCATTCATGCCATTTGATCATCCCATAGTTTTCCTCCTCCCCAACACCCATTTCCCCCTCTGGTCAGTGGTGCTCATGACAAGCTTCTCTCTTGCATTTCTTCATCTTGTTATAGAAAAAGAACCCCCGAAAACAGAGCATCTGCCTGTGGTGGTTGTGGCATTTGTTATGAGCGTGTTTTGGATATCTACAACCGCCGGAGAACTGGTGAATTGCCTTGAAGCTCTAGGTACACTTCTCAAACTGCCGCAAGCACTCCTAGGTCTTACAGTGCTGGCATGGGGAAATTCAGTGGGGGATCTTGTTGCTGATGTTGCAGTTGCTAAAGCTGGTCATCCAGCAATGGCAATGGCTGGATGCTTTGCTGGACCAATGTTTAACATGCTTGTTGGTCTTGGAACTGCTTTGGTCATACAGACGACCAATGTATATCCTAGAGCCTATCAGCTTAATTTCCACGTTGGTATTGTGATCGCATTTGTTTTCTTGCTTTTAAGCCTCATGGGGTCTCTCTTGGTGATCACTTGGTGCAGATTCCGAGTCCCTAGGTTTTGGGGATTCTGTCTGGTAGGCCTTTATATAGCTTTTATGGCAGCAAGTTTGCTAATAGCCATGTTTTCGGGGTGA 1230 0.4911 MAAVTLLALGNGSPDVFSSLAALRAGQYRTGFGAILSAGAFVSALVVGFVAIYAAPFPVDPAPFVRDVLFYLTAALFLFYVYLSAEIFLWQALGFVGFYIFFVGFVFYMDLGMPDRREKSSVDLEGQEESGFAVKAAESPQEDERTSGLCAGFRLISKAWELPVSTLLKLTIPQPAPSQWSRFYASANIALCPLALLYACNSFMPFDHPIVFLLPNTHFPLWSVVLMTSFSLAFLHLVIEKEPPKTEHLPVVVVAFVMSVFWISTTAGELVNCLEALGTLLKLPQALLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVIQTTNVYPRAYQLNFHVGIVIAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGLYIAFMAASLLIAMFSG 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi147g00045 409 Gene3D - 1 124 IPR044880 -
Sebi147g00045 409 Gene3D - 185 402 IPR044880 -
Sebi147g00045 409 Pfam Sodium/calcium exchanger protein 252 402 IPR004837 GO:0016020|GO:0055085
Sebi147g00045 409 Pfam Sodium/calcium exchanger protein 2 107 IPR004837 GO:0016020|GO:0055085
Sebi147g00045 409 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 152 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi147g00045 Sebi-Chr147 623740 626612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi147g00045 1 408 Antiporters AT1G08960 74.155 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi147g00045 K13754 - gmx:100775437 680.633