Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi147g00002 GTCACACGTCTTAAGTGTGGTGGTTTTATGGTGGCCACCCGCTTAAACCACACCATGAGCGACGAAGCTGGTATGAAACAGTTCATGAACACCTGGGCCGAAATGGCTCGAGGTGCAGGCCAACCTTCCATTTTACCTGTGTGGAATAGGGAGCTTCTAATGGCAAGAGATCCACCGCGCATTACATGCAACCATCGCGAATACGAGCAAGTGACCGATAACACCCTCGAGGAAGGGACCATCATGGTTGATCGATCTTTCTTCTTTGGACCCACTGAGATAGCCGCCCTTCGTCGCTTGCTTCCCTTTCACCTTCGCAAACGCAGTACCACATTTGATATTATCACTGCATGTTGGTGGTGTTGTCGCACCAAAGCATTGCAGCTAAAGCCAGAAGAAGAGGTTCGTATGATGTGCATCATCAATTCACGTTCCAGGTTTAACCCTCCTTTACCTGTTGGTTATTATGGCAACGGTTTTGTGTTCCCTGCGACAGTTACAACTGTTGGAAAACTTTGTGGAAACCCATTTGCCTATGTCGTGGATTTAATAAGGAAAGTAAAAGATGAGGTCACCGAGGAGTATGTGCATTCTGTGGCAGATTTTATGGTGTTGAAAGGACAATGTTTGTTTACATCAGTGAGGTCTTGCATTGTGTCTGATCTAACACGTGCTAGATTCAGAGAAGTGGACTTTGGGTGGGGCAAGGCAGTATATGGTGGTGTGGCCAAAGGCGGGGCCGGACCCTTTCCTGGAGCAACCTTTCTCACACCGTCTAAGAATGCAATAGGAGAAGAAGGTATTTTATTGCCAATTTGCTTGCCTGTCGAAACTATGGAGAGGTTTGCTAAAGAGTTGAATGACATGATAGGGAACCATGACCAGCCTACAGTGAGTGGTACTAGGTTTATCATGTCTACCTTATAA 927 0.466 VTRLKCGGFMVATRLNHTMSDEAGMKQFMNTWAEMARGAGQPSILPVWNRELLMARDPPRITCNHREYEQVTDNTLEEGTIMVDRSFFFGPTEIAALRRLLPFHLRKRSTTFDIITACWWCCRTKALQLKPEEEVRMMCIINSRSRFNPPLPVGYYGNGFVFPATVTTVGKLCGNPFAYVVDLIRKVKDEVTEEYVHSVADFMVLKGQCLFTSVRSCIVSDLTRARFREVDFGWGKAVYGGVAKGGAGPFPGATFLTPSKNAIGEEGILLPICLPVETMERFAKELNDMIGNHDQPTVSGTRFIMSTL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi147g00002 308 Gene3D - 1 65 IPR023213 -
Sebi147g00002 308 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 286 - -
Sebi147g00002 308 Pfam Transferase family 1 288 - -
Sebi147g00002 308 Gene3D - 66 286 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi147g00002 Sebi-Chr147 34084 35010 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi147g00002 1 286 Monolignol Biosynthesis Gene Families AT5G48930 28.896 8.72e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi147g00002 K19861 - gmx:100792864 431.024