Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi147g00001 ATGGCTCTATCACCTCCCTCTCTAATTACATTTAAAGTGCGAAGGTGCCGACCGGAGCTAGTGGCTCCTGCTACACCCACCCCTCGCGAAGTTAAACTATTATCTGGCATTGATGATCAAGAAGGCCTGCGTTTCCAAATCTCAATCGTACAAGTGTATCGTCATGAACCATCCATGGAAGGGAAAGACCCTGTTCAAGTCCTTAAAAAGGCACTCGCACAAACACCTGTATTCTATTACCCCTTTGCGGGTAGACTTAGGGAGGGACCTAACTGCAAATTGATGGTGGATTGTACTGGGGAGGGCGTCATGTTCATTGAAGCTGATGCAGATGTAACACTCCATCAATTCGGTGATGCTCTTCAACCTCCATTCCCATGCTTCCAAGAGCTCTTATATGACGTTCCAGGCTCAGAACATGTTATCAATTGTCCCCTTCTACTCATACAG 450 0.4667 MALSPPSLITFKVRRCRPELVAPATPTPREVKLLSGIDDQEGLRFQISIVQVYRHEPSMEGKDPVQVLKKALAQTPVFYYPFAGRLREGPNCKLMVDCTGEGVMFIEADADVTLHQFGDALQPPFPCFQELLYDVPGSEHVINCPLLLIQ 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi147g00001 150 Gene3D - 11 150 IPR023213 -
Sebi147g00001 150 PANTHER ACYL TRANSFERASE 4 11 131 - -
Sebi147g00001 150 Pfam Transferase family 12 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi147g00001 Sebi-Chr147 31979 32428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi147g00001 12 150 Monolignol Biosynthesis Gene Families AT5G48930 33.813 3.19e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi147g00001 K19861 - tcc:18599665 238.039