Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi146g00030 ATGAAGGGACATCCCTGGTATGGTGACTGGGGTTATCAATTTGGCTCTGGTAGCTATGGTCTCACACAGGAAGCATATAAGACCACTGTTGAAAGGTGGACTGTGGATTGCAGCTGTGGGGCTAAGGATGATGATGGGGAGAGAATGTTGGCTTGTAATATATGTGGAGTGTGGTGA 177 0.4746 MKGHPWYGDWGYQFGSGSYGLTQEAYKTTVERWTVDCSCGAKDDDGERMLACNICGVW 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi146g00030 58 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 58 IPR013083 -
Sebi146g00030 58 SUPERFAMILY FYVE/PHD zinc finger 25 58 IPR011011 -
Sebi146g00030 58 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 30 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi146g00030 Sebi-Chr146 950264 950440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi146g00030 35 58 PHD Transcription Factor Family AT5G22260 58.333 1.28e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi146g00030 K26271 - jre:109001284 72.4034