Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi146g00029 ATGTGTTATCCAAGCCTTTTGCTCTCAAGCTTATACTATTCAAATCAGAATTCTGAGCAGACTCGTTTTGGACCTATATTCAACAAGTTGGTGAAGGAGCTTGGGGAACCTGTTGACTTTGAACTTCCAGATTGGTCAAGAGACGGTTTGAGGATGATGGCATATTTTGTTCCTGCACAAGTTCACCTGGATCTACTGATGTATGTGGTAGAGATTGCCACTGTGGGCTGTAAATGTGGGAGCTCCTGTCTTAACAAACCATTTCAGCAACGTCCTGTGAAAAAGATGAAATTGGTTCAGACTGAGAAGTGTGGTTCTGGAATTGTTGCGGATGAAGATATCAAGGTTGGGGAGTTTGTTATTGAATATGTTGGAGAAGTCATTGATGACAAAACATGTGAAGAAAGGCTTTGGAATATGAAACACCGTGGGGAAACAAACTTTTACTTATGTGAAATCAATCGAGATATGGTGATAGATGCAACATATAAGGGAAACAAATCAAGATATATCAATCATAGTTGCTGCCCCAATACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTTGCAACTCGCGACATACAAAAGGGCGAGCATCTGACTTATGATTACCAGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGCTGGGTGTAGGCGTAAGCTGGGTGTGCGACCTAACAAGCCTAAAATGTCTTCAGATGCTGCATTAAAATTAGTTGCTTATCAGGTTTGTCAAAATGGAGGCTTGCAAATTGGAAGTTCTCGTGTTGTTGACAAATCGAAGTGCTTACACAATTGCATTGGTGAAATTATTAGGATAAAACAACTTGGCAATATGAGGTTTGAAAGGAAGTGA 888 0.4009 MCYPSLLLSSLYYSNQNSEQTRFGPIFNKLVKELGEPVDFELPDWSRDGLRMMAYFVPAQVHLDLLMYVVEIATVGCKCGSSCLNKPFQQRPVKKMKLVQTEKCGSGIVADEDIKVGEFVIEYVGEVIDDKTCEERLWNMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIQKGEHLTYDYQFVQFGADQDCHCGAAGCRRKLGVRPNKPKMSSDAALKLVAYQVCQNGGLQIGSSRVVDKSKCLHNCIGEIIRIKQLGNMRFERK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi146g00029 295 Pfam SET domain 105 210 IPR001214 GO:0005515
Sebi146g00029 295 PANTHER SET DOMAIN PROTEINS 76 240 - -
Sebi146g00029 295 SMART PostSET_3 217 233 IPR003616 -
Sebi146g00029 295 Gene3D SET domain 60 249 IPR046341 -
Sebi146g00029 295 SUPERFAMILY SET domain 67 229 IPR046341 -
Sebi146g00029 295 ProSiteProfiles SET domain profile. 94 211 IPR001214 GO:0005515
Sebi146g00029 295 SMART set_7 94 217 IPR001214 GO:0005515
Sebi146g00029 295 ProSiteProfiles Post-SET domain profile. 217 233 IPR003616 -
Sebi146g00029 295 CDD SET_ASHR3-like 95 233 - -
Sebi146g00029 295 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 76 271 IPR025787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi146g00029 Sebi-Chr146 936338 944287 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi146g00029 77 229 C2H2 Transcription Factor Family AT2G23740 35.260 4.83e-22 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi146g00029 SET 1.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi146g00029 - - gmx:100808183 469.929