Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi146g00013 ATGCTATTGAGTGGAGTGATAGGTTTGGTGGGAGGAAAGGGTTTCGCTGGTTTAGATGATGACAGTGTCCGAGTCTCTGCTGTTCTCACAAATGCTCCTTTAATGCTGAACTTGGATTGTGATCACTATGTCAATAACAGCAAGGCAGCCCGAGAAGCCATGTGCTTTTTGATGGATCCTCAAACTGGGAAGAAGGTCTGCTATGTCCAGTTTCCTCAGAGAGTTTATGGTATTGATACTCATGATCATTATGCCAACAGGAACACAGTTTTCTTTGATATTAACATAAAGGGTCTAGATGGTATTCAGGATCCTGTATATGTGGGGACAGGATGTGTTTTAGGAGGCAAGATTTGGATGGATGATGACAAAGAGCTGCTAATGTCCCAAATGAATTTTGAGAAGAAATTTGGGCAGTCATCTGTTTTTGTGACTTCTACCTTGATGGAAGAGGGTGGTGTACCTCCTTCCTCAAGTCCAGAAGCCCTGCTTAAAGAAGCCATTCATGTAATTAGCTGTGGATATGAAGATAAAACTGAATGGGGACTTGAGGTATATATAACAACAAACAACTGCCTTATGAGACCTTGA 591 0.4179 MLLSGVIGLVGGKGFAGLDDDSVRVSAVLTNAPLMLNLDCDHYVNNSKAAREAMCFLMDPQTGKKVCYVQFPQRVYGIDTHDHYANRNTVFFDINIKGLDGIQDPVYVGTGCVLGGKIWMDDDKELLMSQMNFEKKFGQSSVFVTSTLMEEGGVPPSSSPEALLKEAIHVISCGYEDKTEWGLEVYITTNNCLMRP 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi146g00013 196 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 23 185 - -
Sebi146g00013 196 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 22 121 IPR029044 -
Sebi146g00013 196 Pfam Cellulose synthase 16 114 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sebi146g00013 196 Pfam Cellulose synthase 120 185 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi146g00013 Sebi-Chr146 475078 476225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi146g00013 16 185 Cell Wall Biosynthesis AT5G17420 63.927 2.69e-83 264