Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi145g00045 ATGGGAATGAAGAGCACAGGAGGAGAGATTGTTCAAGTCCAAGGAGGCCACATTGTTCGATCCACAGGTAGAAAAGATCGTCACAGTAAAGTTTACACTGCAAAAGGACCTCGTGATCGCAGGGTTAGGCTATCAGCACACACAGCTATTCAATTCTATGATGTTCAAGACCGTCTTGGCTATGACAGACCCAGTAAGGCTGTGGATTGGCTCATCAAAAAGGCAAAATCTGCCATTGATAAGCTTGCTGAGCTTCCTCCATGGCACCCAACTCCTACTAATAATGTCACAGAAGAAGGCCAAGAGACAGAACAGAATGCAGGGTCAAGTGAAATGGCTATTGCAGCAGAACACTCTGAGTCTTCTGGTTACAATTTTCAGCTCCAAAGGCAATTAGGTGAGGACCCAGATAACCATCACTCAGCTTTTATTCCTTCACCTATTGACACTGATGCCATAGCCTTTTTTCCCACAACCTCAGCTACTTCCTCTATCAATTTTCAAAGCTACCCTCCTGATATAATCTCTAGAAACAATAACTCCACACAGGACCTTGGTCTTTCTCTTCATTCTTTTCAAGATCCTGGTTTGATTCATGGCCAATCCCAAGGTGGTGCTAATCAAACACCTTCTAATGACCAAACCCTTTTCTCTGGCTCAACCCCTGTTGGGTTTGATGCCAATTATCACAGGATTGTGACTTGGAACAATGATGCAACTACAGATATGAACAGAACCGGGTTCATGGTCAATTCACCTGCATTTCTAGGCCAAGGTTCACAATATTCCCATAGGGGGACCCTTCAGTCCAGTTTTTCACCATCACTTCGTCCTTGGAATGATATTCCAATGGCTTCCTCAGATCATCACAATCATCATAAGACTCAACCAATTCACCAAGCTTCCATCTTTGGTAGCAGGTTTCTGTCTGATGCATTACCTGGTTTCTGCATTCCTGCTAGAATTCAAGGTGAGGATGAGAGCCATGGTGTTGGTTCTGACAGGCCATCATCTTCTCCTCCTAATTCTCATCACTGA 1038 0.4422 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAELPPWHPTPTNNVTEEGQETEQNAGSSEMAIAAEHSESSGYNFQLQRQLGEDPDNHHSAFIPSPIDTDAIAFFPTTSATSSINFQSYPPDIISRNNNSTQDLGLSLHSFQDPGLIHGQSQGGANQTPSNDQTLFSGSTPVGFDANYHRIVTWNNDATTDMNRTGFMVNSPAFLGQGSQYSHRGTLQSSFSPSLRPWNDIPMASSDHHNHHKTQPIHQASIFGSRFLSDALPGFCIPARIQGEDESHGVGSDRPSSSPPNSHH 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi145g00045 345 MobiDBLite consensus disorder prediction 90 106 - -
Sebi145g00045 345 Pfam TCP family transcription factor 23 119 IPR017887 -
Sebi145g00045 345 MobiDBLite consensus disorder prediction 325 345 - -
Sebi145g00045 345 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Sebi145g00045 345 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 281 IPR005333 GO:0003700
Sebi145g00045 345 MobiDBLite consensus disorder prediction 84 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi145g00045 Sebi-Chr145 1619960 1620997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi145g00045 8 345 TCP Transcription Factor Family AT3G15030 43.860 9.79e-77 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sebi145g00045 TCP 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi145g00045 - - gmx:100814907 589.341