Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi145g00040 ATGTCTGGAAGTATGAGCAATGCGGACACAGGGGGATTGGGAATGGGTGATTTGAATTTGGGTTCTGATAATAATGTGGAAGTTAATGAAACAAAATCAATTGAGAATAGTAGTTGTTCTTATTATTTGGAGGATGATTACAGAGTTGTATGTGTAGTAGATGAGAATTGGGGAAATAATAGTGATGTTTATGGTGATGAAGATAGTGGTGGAAGTCCTTCGTCGGAGAATAATGATTGTTTGGGTGGTGCTTTCTTTCGTGGTGATGAGAATGGGGGTGATTTCTTGGTGGGAGAAGATTGGGAAGATAGTAATGATAACGATCAGGGTGATAATTGTGGTGATGATAAAATTGTTATTGAAACAAATGATGATCTTATTAACATAGGAGATTTGTCTTTGTTCAGTCCAAATGAGATTGAGAGTTATGAATTTGGTAGTATTGAGGTAGCATACAAGTTCTATCGTGAATATGGGTTTGCTAATGGTTTTGGAATAAGAAGGGGGAGAACTTTAAAGAGCAAAAAAAAAACATTGGAGGCGTATCAAAAAGAGTTTATGTGTTGTAGAGCTGGAAAACGTGAAGATCGTGGTCAAAAAAATGAAGAGAAGGTCCGTGAGCAGAAGGCAGAAACTAGGTGTGAATGTAAGGCGAGATTTCATATTCATGTGAATAAGTTATCTGGTAGGTGGTATTGTGTTTGCTTTGAAGATGAACACAACCATGGTCGGTTAGGTGAAGTGCATTGTAGTATGTTACCAAGTTATAGAAGAATGTCTGACAGTGATATTGTACAAATGAATAACATGATGAAGGTTGGGATTAGGCCACCTAATATATTCAACACATTTGCTAGTCAGTCGGGTGGTTATGAGAAGATATGTTTTAGAAAGAAAGACATGTATAACAAGATAGGTGAGCAAAGGCGAAATTTATGTTGTGATGCTAAAGGAGCCATTGAATACCTTGGTTTGCTTGGTCTGAATGATCGTATGATGTATTATGAGCACAGTATTGATGAAAATGGTAGGTTGCAACATCTTTTTTGGAGTGATGGATATAGCCAAGTGGATTACAACATTTTTGGGGAAGTGCTAGCATTTGATGCAACATATGGCAAGAATAAGTATTTAATGCCGCTAGTTGTATTCTCTGGTGTTAATAGTCATAATTGTTCCACTATATTTGCAGCTGCTATTATTGCCAATGAGACCGAGGAGAATTATGTTTGGCTTTTGGAGCAGTTTTCAAAATGTATGAAGGGTAAGTTGCCTAGTGCTGTAATCACTGATGGTGATGTAGCTATGAAAAATGCTATTGAAAGGGTATTTTCAAATGCTTATCACAGGTTGTGTGCATGGCAGCTGATGAGGAATGCCACTTCTAATATAAAAAATGCAGATTTCACAAAAGGATTTGAGGATTGTATGCTTGGCTATTATGATGTGGGGACATTTAGAAATAAATGGTTAGAATTGGTTGCAAAATTTGGGCTTGAAGAGAACCCATGGGTGGCTGCTTTATATGAGAAGAGGAGTATGTGGGCAACAACTTATTTGCGGGGTAAATTTTTTGCTGGCTTTAGAACCACCTCTAGGAGTGAGGGATTGCATTCTGAGTTGGGAAAGTTTGTAAATTCACGGTATAATTTGAGTGACTTCTTGCAACATTTTCAGCGTTGTCTCAATCATATGCGTTTCAAAGAGAAGGAGGATGACTATACTTCAATTCATGGGGAGCCAGTGATACAAACTCAGTTTGAAGCACTTGAAAGATCAGCTGCTAAAGTGTATACAAGGAGGGTTTTCTTCCTATTTAGGCGAGTGTTGTTTAGGGCTTCCAAGTTGATAGTTACTGATATAGCAAAGGCAGTTCGATGTGTTATTTTCCGAGTGATCAACCAACTAGGAATGAATTGGGAATGTCGTGTTTCGTTGTATGACTCCACCAATGAATTAAAATGTGCCTGCCTTAGAATGGAGTCTAGAGGGCTACCTTGTGAACACATAGTTACTGTGCTGAATCATTTAGGTATTGATGAGCTGCCAGAAAGTTTTGTCCTTAAAAGGTGGAGCAAGTCTGCGAAGGATGGTTTGGGTGGTACAGAGTTTGAGACTAATCATAGTTTAGATGCTGGTTTCAGTGCTCGTAGGGCAGCACTGAATGGTTTCTACAATCATATTAGTGAGTACAAGGCTGCTACCATACCAAAATACAATGTCGAGTGA 2229 0.3836 MSGSMSNADTGGLGMGDLNLGSDNNVEVNETKSIENSSCSYYLEDDYRVVCVVDENWGNNSDVYGDEDSGGSPSSENNDCLGGAFFRGDENGGDFLVGEDWEDSNDNDQGDNCGDDKIVIETNDDLINIGDLSLFSPNEIESYEFGSIEVAYKFYREYGFANGFGIRRGRTLKSKKKTLEAYQKEFMCCRAGKREDRGQKNEEKVREQKAETRCECKARFHIHVNKLSGRWYCVCFEDEHNHGRLGEVHCSMLPSYRRMSDSDIVQMNNMMKVGIRPPNIFNTFASQSGGYEKICFRKKDMYNKIGEQRRNLCCDAKGAIEYLGLLGLNDRMMYYEHSIDENGRLQHLFWSDGYSQVDYNIFGEVLAFDATYGKNKYLMPLVVFSGVNSHNCSTIFAAAIIANETEENYVWLLEQFSKCMKGKLPSAVITDGDVAMKNAIERVFSNAYHRLCAWQLMRNATSNIKNADFTKGFEDCMLGYYDVGTFRNKWLELVAKFGLEENPWVAALYEKRSMWATTYLRGKFFAGFRTTSRSEGLHSELGKFVNSRYNLSDFLQHFQRCLNHMRFKEKEDDYTSIHGEPVIQTQFEALERSAAKVYTRRVFFLFRRVLFRASKLIVTDIAKAVRCVIFRVINQLGMNWECRVSLYDSTNELKCACLRMESRGLPCEHIVTVLNHLGIDELPESFVLKRWSKSAKDGLGGTEFETNHSLDAGFSARRAALNGFYNHISEYKAATIPKYNVE 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi145g00040 742 Pfam SWIM zinc finger 643 677 IPR007527 GO:0008270
Sebi145g00040 742 MobiDBLite consensus disorder prediction 62 79 - -
Sebi145g00040 742 Pfam FAR1 DNA-binding domain 153 242 IPR004330 -
Sebi145g00040 742 SMART 26again6 653 680 IPR006564 GO:0008270
Sebi145g00040 742 ProSiteProfiles Zinc finger SWIM-type profile. 640 678 IPR007527 GO:0008270
Sebi145g00040 742 MobiDBLite consensus disorder prediction 62 83 - -
Sebi145g00040 742 Pfam MULE transposase domain 365 459 IPR018289 -
Sebi145g00040 742 PANTHER OS01G0519700 PROTEIN 143 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi145g00040 Sebi-Chr145 1264945 1267283 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi145g00040 MULE 2.8e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi145g00040 - - tpra:123913749 657.907