Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi145g00002 GTTTCTGATTTTTATAAGCGACCCAATGTGGAAAGTCCAGCAAAAGCTGCATTAGATGAAACCTCCCACATGTTTGAGAATCGAGGGGTCCAGATGCTGGGGCAAATAAAGCATGGTTCATGCCGTCCTCGAGCTATATTATTTAAAGTATTAGCTGATACTGTAGGCCTTGAAAGTAGGCTCATGGTGGGCTTGCCAAATGATGGGGCTGTTGAATGTGTAGATTCATACAAGCATATGTCTGTGATAGTTGTACTGAATTCTGTGGAAATGCTGGTTGATCTTATGCGATTTCCGGGCCAATTGTTACCAAGATCAACCAAGGCAGTCTTTATGACTCATATTTCTGCAGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCGCCATTAGAACCAAACAGTCCCTTATTTGGGGTTTCAGAGAGTGCTGAGAAGGAGGAAAACCTCCAATTTCATAGAAAATTTGAAGTGTCTTCAAATGTTTCAGGCCTTTCCTTGAGAAACATGATGTTACGGTCAAATAGTAGTTTGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGTATTTGGTCGGCGTAGTCGGAAAAAGGTCATTGCTGAGCAGAGGACAGCTAGTTCAAGTCCAGAACATCCATCATTTCGAGCACGTGGACGGTCCCTACTTAGTGGTGATAGGACATCTTTTAGAGATTTTGCAGATGATCAGGCTACATCAAGATCCAGCTATAGGTCAGATGGTGCATCCTCATCAGAAGCTCGTAGGATACGAAGAAGAAGCATCAGTATTACGCCAGAGATTGGTGATGATATCGTAAGGGCTGTACGGGCCATGAATGAAACACTAAAGCAAAACCGTCTTCTGAGAGAACGAGGAGATGATAATTCATTACCCCATTCTCCAAACAATAGAAGTAATGATTCAAATCTTCAGAAAAATGTGCCAAATTTCCATCTTGACGGTCATGATGAAAGGTCCACCTTATCTTCTCATCAACATGACCAAGTGACTTCCCAAAAGGCAGTGTCATTACCGTCTTCACCGCATGACTATAGAGGTCAAACTTCTGGGAGAAGCGGCCCATCCAGATATGGAGTGAATGATGAAATGGAGTCGACTTGGAATAAAGTACTTGAATCTCCAATGTTCAATAATAAACCTCTATTACCATATGAAGAATGGAATATTGACTTCTCAGAATTAACTGTTGCAACTCGTGTGGGGATTGGCTTCTTTGGAGAAGTCTTCCGTGGCGTATGGAATGGCACAGATGTAGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCTATTCTGAGAATATATGGAGATGGGATCATTGTATTACTTGATACATTTGAGTGGCCAAAAGAAAAAGCTCAGTTGGCGGAGAAGACTAAGGATGTTGCGTGA 1455 0.4165 VSDFYKRPNVESPAKAALDETSHMFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLMVGLPNDGAVECVDSYKHMSVIVVLNSVEMLVDLMRFPGQLLPRSTKAVFMTHISAAGESDSAENDSCDSPLEPNSPLFGVSESAEKEENLQFHRKFEVSSNVSGLSLRNMMLRSNSSLSLSHSEPNIATVFGRRSRKKVIAEQRTASSSPEHPSFRARGRSLLSGDRTSFRDFADDQATSRSSYRSDGASSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLRERGDDNSLPHSPNNRSNDSNLQKNVPNFHLDGHDERSTLSSHQHDQVTSQKAVSLPSSPHDYRGQTSGRSGPSRYGVNDEMESTWNKVLESPMFNNKPLLPYEEWNIDFSELTVATRVGIGFFGEVFRGVWNGTDVAIKVFLEQDLTAENMEDFCNEISILRIYGDGIIVLLDTFEWPKEKAQLAEKTKDVA 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi145g00002 484 MobiDBLite consensus disorder prediction 334 369 - -
Sebi145g00002 484 MobiDBLite consensus disorder prediction 301 318 - -
Sebi145g00002 484 ProSiteProfiles Protein kinase domain profile. 404 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi145g00002 484 MobiDBLite consensus disorder prediction 287 369 - -
Sebi145g00002 484 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 204 454 - -
Sebi145g00002 484 MobiDBLite consensus disorder prediction 201 260 - -
Sebi145g00002 484 ProSitePatterns Protein kinases ATP-binding region signature. 410 431 IPR017441 GO:0005524
Sebi145g00002 484 MobiDBLite consensus disorder prediction 237 252 - -
Sebi145g00002 484 Pfam Ethylene-responsive protein kinase Le-CTR1 1 102 - -
Sebi145g00002 484 SUPERFAMILY Protein kinase-like (PK-like) 377 467 IPR011009 -
Sebi145g00002 484 Gene3D Phosphorylase Kinase; domain 1 395 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi145g00002 Sebi-Chr145 68105 82174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi145g00002 1 478 MAP Kinase Kinase Kinase AT3G58640 66.463 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Sebi145g00002 EDR1 3e-27 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi145g00002 - - aprc:113853840 793.497