Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi144g00092 ATGGAGAATTCATTGGGGACCTATGAAACAGAGCTGAATCTCAAGGCAACAGAGTTGAGGTTGGGGTTGCCTGGGAGTGATGAGCCGGAGAAACATTCATGCATTGTTAGAAGCAACAAGAGATCTTCACCAGAAGCCAGTGAGGAAGAGTCCATAAGCAACAGCAACGTGAATACTTTAAATATTGATGACCAAGACAATGTCCCGCCTGCAAAGGCACAAGTAGTAGGATGGCCACCAATTAGATCTTTTAGGAAGAATAGTTTGCAACAGAAGAAGGAGGAACAGGGTGAAGGTGCTGGGATGTACGTGAAAGTGAGCATGGCGGGTGCACCTTATTTGAGGAAGATAGATCTCAAGGTTTACAAGAGCTACCCTGAACTCCTCAAGGCCTTGGAAAAAATGTTCAAGTGCACATTTGGTGAATATTCAGAAAGGGAAGGCTACAATGGATCTGAGTATGCTCCAACTTATGAAGACAAGGACGGTGACTGGATGTTGGTTGGAGACGTTCCATGGCACATGTTTATGTCCTCCTGCAAGAGGCTTAGAATTATGAAAGGATCAGAAGCAAAGGGGTTGGGTTGTTTTTGA 594 0.4478 MENSLGTYETELNLKATELRLGLPGSDEPEKHSCIVRSNKRSSPEASEEESISNSNVNTLNIDDQDNVPPAKAQVVGWPPIRSFRKNSLQQKKEEQGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALEKMFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWHMFMSSCKRLRIMKGSEAKGLGCF 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi144g00092 197 MobiDBLite consensus disorder prediction 19 71 - -
Sebi144g00092 197 MobiDBLite consensus disorder prediction 24 47 - -
Sebi144g00092 197 SUPERFAMILY CAD & PB1 domains 97 187 - -
Sebi144g00092 197 Pfam AUX/IAA family 40 195 IPR033389 -
Sebi144g00092 197 FunFam Auxin-responsive protein 96 197 - -
Sebi144g00092 197 MobiDBLite consensus disorder prediction 48 65 - -
Sebi144g00092 197 Gene3D - 95 197 - -
Sebi144g00092 197 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 192 IPR003311 GO:0005634|GO:0006355
Sebi144g00092 197 ProSiteProfiles PB1 domain profile. 101 188 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi144g00092 Sebi-Chr144 1416169 1417464 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi144g00092 92 194 B3 DNA Binding Superfamily AT2G46530 37.864 5.50e-14 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Sebi144g00092 AUX_IAA 1.3e-59 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi144g00092 K14484 - gmx:100780752 330.487