Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi144g00089 ATGGAAGTAATTGGCCTCAAGGAGAAGAAGATGGTGTTTGAGGAAACTGAGCTCAGGCTGGGACTGCCTGGAAATGGATCAGCCAAAGCCACTACTGAAGCACTAGCAGCAAGGAAGAGAGGATTCTCTGAAACTGAGTCTGAGTCTGAGAATGAAACAATAACCACTGTGGATTTGAAGCTTAACCTCTCCCCAAAGGAAGCAGCTTCTTCTGCTGCTGTGGCAGATCCACCACCTAAGGACAAGACCCTCCTGCTTTCCGATTCCGCCAAGCCTCCTGCTAAGGCGCAAGTGGTGGGTTGGCCACCGGTTCGGTCGTACCGGAAGAACATGTTTGCAGGCTCAGCAGCCCAAAAGAGCAGCAGCGGATCAGGATCAGGAGATCAGGAGAACAGCCCTAATGGATCGGGAAGTTTTGTGAAAGTGAGCATGGATGGAGCACCTTACCTCCGCAAAGTGGACTTGAAGATGTACAACAGTTACCCTCAGCTCTCTGATGCATTAGGCAAAATGTTTAGCTCTTTTACCATTGGGAATTGCGAATCCCAAGGCATTAAGGATTTCATGAATGAGAGTAAGTTGATGGATCTGTTGAACAGCTCCGATTATGTCCCAACCTATGAAGACAAGGATGGCGACTGGATGCTTGTCGGTGATGTCCCGTGGGAGATGTTTGTTGAATCTTGCAAGCGTTTACGTATCATGAAAGGAAAGGAAGCTATTGGACTGGCACCTAGAGCCATGGAGAAATGCAAGAACAGGAGCTAG 768 0.487 MEVIGLKEKKMVFEETELRLGLPGNGSAKATTEALAARKRGFSETESESENETITTVDLKLNLSPKEAASSAAVADPPPKDKTLLLSDSAKPPAKAQVVGWPPVRSYRKNMFAGSAAQKSSSGSGSGDQENSPNGSGSFVKVSMDGAPYLRKVDLKMYNSYPQLSDALGKMFSSFTIGNCESQGIKDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi144g00089 255 SUPERFAMILY CAD & PB1 domains 129 236 - -
Sebi144g00089 255 Pfam AUX/IAA family 15 246 IPR033389 -
Sebi144g00089 255 Gene3D - 132 249 - -
Sebi144g00089 255 ProSiteProfiles PB1 domain profile. 137 237 IPR000270 GO:0005515
Sebi144g00089 255 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 13 242 IPR003311 GO:0005634|GO:0006355
Sebi144g00089 255 FunFam Auxin-responsive protein 132 247 - -
Sebi144g00089 255 MobiDBLite consensus disorder prediction 113 139 - -
Sebi144g00089 255 MobiDBLite consensus disorder prediction 21 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi144g00089 Sebi-Chr144 1379938 1382292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi144g00089 118 245 B3 DNA Binding Superfamily AT4G23980 29.688 3.36e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Sebi144g00089 AUX_IAA 9.2e-86 CL0072