Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi144g00080 ATGATGTTCCGAAGGAACAATAGTAGTGGCATAAACCTGAATTTTGACAGCACTAGCTGCACACCAACAATTTCATCTACTAGGTCTTTCATGTCTTCCTTGAGCATAGATGGAAGCGTAGCTAACTTAGATGGAAGTGCCTTCCATTTAATAGGAGCTCCACACTCTTCTGATCAGAATTCACAGCAGCATAAGAGAAAATGTTCTGCCAAAGGTGATGAGGGCAGCTTGAAATGTGGGAGCAGTTCTAGATGCCATTGCTCAAAGAAGAGGTGGCCTGCCATCAGCAACAAACTTGCAGATATCCCTCCCGATGATTATTCATGGAGGAAGTACGGGCAGAAGCCAATCAAGGGCTCTCCTCACCCTAGGGGATATTATAAGTGTAGCAGCATGAGAGGCTGTCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTACCATGCTAATTGTTACTTATGAAGGCGAGCATAACCACCCTAAGTTACCAGCACAATCAGCAAATGCATGA 516 0.4535 MMFRRNNSSGINLNFDSTSCTPTISSTRSFMSSLSIDGSVANLDGSAFHLIGAPHSSDQNSQQHKRKCSAKGDEGSLKCGSSSRCHCSKKRWPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPAQSANA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi144g00080 171 Gene3D WRKY domain 94 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi144g00080 171 FunFam WRKY transcription factor 65 87 164 - -
Sebi144g00080 171 Pfam WRKY DNA -binding domain 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi144g00080 171 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 27 169 IPR044810 GO:0003700
Sebi144g00080 171 ProSiteProfiles WRKY domain profile. 98 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi144g00080 171 MobiDBLite consensus disorder prediction 52 83 - -
Sebi144g00080 171 SUPERFAMILY WRKY DNA-binding domain 101 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi144g00080 171 SMART WRKY_cls 103 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi144g00080 Sebi-Chr144 1217389 1218739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi144g00080 1 168 WRKY Transcription Factor Family AT2G30590 74.302 1.68e-90 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi144g00080 WRKY 1.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi144g00080 - - gmx:100170681 338.191