Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi144g00080 | ATGATGTTCCGAAGGAACAATAGTAGTGGCATAAACCTGAATTTTGACAGCACTAGCTGCACACCAACAATTTCATCTACTAGGTCTTTCATGTCTTCCTTGAGCATAGATGGAAGCGTAGCTAACTTAGATGGAAGTGCCTTCCATTTAATAGGAGCTCCACACTCTTCTGATCAGAATTCACAGCAGCATAAGAGAAAATGTTCTGCCAAAGGTGATGAGGGCAGCTTGAAATGTGGGAGCAGTTCTAGATGCCATTGCTCAAAGAAGAGGTGGCCTGCCATCAGCAACAAACTTGCAGATATCCCTCCCGATGATTATTCATGGAGGAAGTACGGGCAGAAGCCAATCAAGGGCTCTCCTCACCCTAGGGGATATTATAAGTGTAGCAGCATGAGAGGCTGTCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTACCATGCTAATTGTTACTTATGAAGGCGAGCATAACCACCCTAAGTTACCAGCACAATCAGCAAATGCATGA | 516 | 0.4535 | MMFRRNNSSGINLNFDSTSCTPTISSTRSFMSSLSIDGSVANLDGSAFHLIGAPHSSDQNSQQHKRKCSAKGDEGSLKCGSSSRCHCSKKRWPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPAQSANA | 171 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi144g00080 | 171 | Gene3D | WRKY domain | 94 | 165 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi144g00080 | 171 | FunFam | WRKY transcription factor 65 | 87 | 164 | - | - | |
Sebi144g00080 | 171 | Pfam | WRKY DNA -binding domain | 105 | 162 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi144g00080 | 171 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 27 | 169 | IPR044810 | GO:0003700 | |
Sebi144g00080 | 171 | ProSiteProfiles | WRKY domain profile. | 98 | 164 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi144g00080 | 171 | MobiDBLite | consensus disorder prediction | 52 | 83 | - | - | |
Sebi144g00080 | 171 | SUPERFAMILY | WRKY DNA-binding domain | 101 | 163 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi144g00080 | 171 | SMART | WRKY_cls | 103 | 163 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi144g00080 | Sebi-Chr144 | 1217389 | 1218739 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi144g00080 | 1 | 168 | WRKY Transcription Factor Family | AT2G30590 | 74.302 | 1.68e-90 | 267 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Sebi144g00080 | WRKY | 1.4e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi144g00080 | - | - | gmx:100170681 | 338.191 |