Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi144g00074 ATGACTGACATATTTGAAAAGCAATCATCTCCTGAAGCTTCAAATTATGCATCAAGCAGTGGCATGTCTGGGGATGATAAGGAAATTGGTTATAGAGATGCAACATCAAAGCATAGATATCTTCTGGTCAACAACTCTCTTCTTCACTTGTTACCCATCAAAATTGACCTGAATTTCGCTCGCATGGTGATGGCAGAGGTGGTGGGGCCAATATCTTGTGCCCATGTTAACCCAGCTGTCACAATAGCCTTTGCAACAATCGGTCAATTCCCATGGTTCAAGGTTCCAATTTACATAATAGCACAGACAATAGGTTCTATGTCGGCAACATATATCGGTAGCCTTGTCTATGGCATAAAATCAGATGTTATGATGACTCGGCCACTCCAAGGGTGTAACTCTGCCTTCTGGGTGGAGTTTATTGCAACTTTCATCATCATGTTTCTGATTGCAGCTTTGACATCTGAGCCTCAATCAGTGGGCCATTTATCTGGCTTTGTTGCTGGAATTGCAATTGGGCTTGCTGTACTAATCACAGGCCCTGTCTCAGGTGGATCAATGAATCCTGCAAGATCATTAGGTCCAGCAATTCTGTCATTGAAATTTAAGGACATGTGGATATACATCCTAGCCCCCAGTGCTGGAGCTGTGGCAGGAGCTCTAATGTTTCGTTTCCTACGTCTTCGAGACCAACATTGTAACAACACTATGTCCTCCCCAGACATCAGTGATGTTGTTCGTCCCATACCCTTTTGTGCAAGTTAG 765 0.4366 MTDIFEKQSSPEASNYASSSGMSGDDKEIGYRDATSKHRYLLVNNSLLHLLPIKIDLNFARMVMAEVVGPISCAHVNPAVTIAFATIGQFPWFKVPIYIIAQTIGSMSATYIGSLVYGIKSDVMMTRPLQGCNSAFWVEFIATFIIMFLIAALTSEPQSVGHLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAILSLKFKDMWIYILAPSAGAVAGALMFRFLRLRDQHCNNTMSSPDISDVVRPIPFCAS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi144g00074 254 PANTHER AQUAPORIN NIP2-1 48 237 IPR034294 -
Sebi144g00074 254 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi144g00074 254 PRINTS Major intrinsic protein family signature 206 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi144g00074 254 PRINTS Major intrinsic protein family signature 57 81 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi144g00074 254 PRINTS Major intrinsic protein family signature 138 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi144g00074 254 PRINTS Major intrinsic protein family signature 94 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi144g00074 254 Pfam Major intrinsic protein 57 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi144g00074 254 MobiDBLite consensus disorder prediction 1 22 - -
Sebi144g00074 254 ProSitePatterns MIP family signature. 75 83 IPR022357 -
Sebi144g00074 254 SUPERFAMILY Aquaporin-like 43 234 IPR023271 -
Sebi144g00074 254 MobiDBLite consensus disorder prediction 1 25 - -
Sebi144g00074 254 Gene3D Glycerol uptake facilitator protein. 36 240 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi144g00074 Sebi-Chr144 1177052 1178976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi144g00074 94 233 Major Intrinsic Protein MIP AT3G06100 53.901 4.90e-49 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi144g00074 K09874 - gmx:100817830 325.479