Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi144g00063 ATGATACAGGGCATCCCAGAAAACATTGTTGTTGGTTCTCACGTTTGGGTTGGAGATCCAGAGTTAGTTTGGGTTGATGGACTTGTACTGAATATTAATGGAGAAGGAGCTGAAATTGAAACAAGCAATGAGAAGAAGGTTGTTTCCCATTTGTCAAAATTACATCCCAAGGATACAGAAGCTCCTGCTGACGGAGTTGATGACATGACCAAGCTTGCTTATTTGCATGAGCCAGGAGTGCTGAATAATTTGGAAACTAGATACAAGATCAATGAAATCTATACTTATACTGGAAATATTCTTATTGCAATCAATCCCTTCCAAAGTCTTCCACACCTGTATGATGCTAATGTGATGAAAAGATACAAAGGAGCCACAATTGGAGATTTAAGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGGGCAATGATTACTGAGGAGAAAAGCAACTCTATTCTGGTTAGCGGTGAGAGTGGTGCTGGTAAGACAGAGACCACCAAAATGCTTATGCGTTACCTAGCATATTTGGGTGGTAACACTGCATCTGAAGGACGAACTGTTGAACAACAAGTTCTAGAATCAAACCCAGTTCTTGAAGCATTTGGTAACGCAAAAACAGTTAGAAATGACAATTCTAGCCGATTCGGAAAATTTGTTGAGATTCAATTTGATAAGTTTGGACGAATATCTGGTGCAGCCATTAGAACTTATCTCCTTGAGAAATCTCGTGTTTGCCAAATCTCCGATCCTGAGCGTAACTATCACTGTTTTTACCTTCTCTGTGCTTCTCCTCCTGAGGAAAAGGAGAAATATAAACTGGGAGATCCCAGATCATTTCACTATCTTAATCAATCCAGTTGCTATGAATTAGTTGGTGTTAATGCTGCTCAAGAGTATCTTAGCACAAAGAGAGCCATGGATATTGTGGGAATCAGCCAGGAGGAGCAAGATGCAATATTCAGAGTTGTAGCTGCTATTCTTCATCTTGGAAACATTAAATTTGCAAAATCAGAAGAAACTGATTCGTCAGTTCTAGAAGATGAAGAATCCAAGTTTCATCTCCAAACAGCAGCAGAACTTCTCATGTGTGATCCTGATGCTTTGGAAGTTGCTCTTTGTAAGCGCGTGATGATCACCCCAGAAGAAATCATCAAAAGAAGTCTTGATCCTCTTGGTGCAACAGTTAGCAGGGATGGTTTAGCAAAAACATTATATTCTCGTTTATTTGATTGGTTAGTTGATAAAATCAATAAATCCATTGGGCAGGATCCTAACTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTCAAACTAATAGTTTTGAGCAATTCTGTATTAATTTCACAAATGAAAAGCTTCAGCAACACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAGGAATACACAAAAGAAGGGATTGACTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTACTGGATCTCATTGAAAAGAAACCAGGTGGAATAATTGCTCTGCTTGATGAAGCTTGTATGTTTCCAAAGTCAACTCATGAAACATTTTCCCAAAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATCAAGCCAAAATTGGCACGCTCTGACTTCACTATTGTTCATTATGCAGGAGAGGTTCAATATCAGTCTGAGCAGTTTATAGACAAAAATAAAGACTATGTTGTTCCTGAACATCAAGAAATGCTAAGTGCTTCCAAATGTTCGTTTGTATCAGGCCTTTTTCCTCCGCTTTCTGAGGAGACAGCCAAATCTGCTAAGTTTTCTTCTATTGGTTCTCGTTTTAAGCTACAATTGCAACAATTGATGGAAACGCTCAATCATACAGAGCCCCACTATATTCGATGTGTGAAGCCAAATAGTCTATTAAAACCTGGCATATTTGAGAATATGAATGTCATCCAACAATTACGTTCTGGTGGTGTTCTTGAAGCAGTAAGAATTAAATGTGCTGGATTCCCCACTCACAGGAACTTTCATGAGTTTTTGACTCGAGTACGCGTTCTTGCACCAGAAGTTCTTCGAGGGAACTTTGAAGAGAAGGATTCATGTAAAAAGATTTTGGAGAAGATTGGGCTGACAGGTTATCAGATAGGGGAAACTAAAATATTCCTAAGAGCTGGTCAGATGGCTGAATTGGATGCTCGTAGAGCATGCCTGCTTAGCAATTCTGCAACAGTTATTCAAAAGCAGATTAAAACTCATATTAGTCGGAAAACATATAATGCATTGCGGCAGTCCTCTATCTTTGTGCAATCCTTTTGCAGAGGAGGACTGGCTCGGAGATCATATTATCACATGAAGAGGGAAGCAGCTGCAACCAGAATTCAAACATATATGCGTGGAAAATTAGCCAGAAAATGGTACACTGAAATAAGGATTTCTGCCATTGTCTTGCAGACAGGTTTTCGTACAATGGCTGTTCATGATCAATTTAGATATAGAAAGAAAACTGTTGCATCTACTAGGATTCAGGTTAGAGCTGTCCCTGTAATGTAA 2547 0.3895 MIQGIPENIVVGSHVWVGDPELVWVDGLVLNINGEGAEIETSNEKKVVSHLSKLHPKDTEAPADGVDDMTKLAYLHEPGVLNNLETRYKINEIYTYTGNILIAINPFQSLPHLYDANVMKRYKGATIGDLSPHVFAIAEAAYRAMITEEKSNSILVSGESGAGKTETTKMLMRYLAYLGGNTASEGRTVEQQVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFDKFGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEEKEKYKLGDPRSFHYLNQSSCYELVGVNAAQEYLSTKRAMDIVGISQEEQDAIFRVVAAILHLGNIKFAKSEETDSSVLEDEESKFHLQTAAELLMCDPDALEVALCKRVMITPEEIIKRSLDPLGATVSRDGLAKTLYSRLFDWLVDKINKSIGQDPNSKCLIGVLDIYGFESFQTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEGIDWSYLEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLYQTFKDHKRFIKPKLARSDFTIVHYAGEVQYQSEQFIDKNKDYVVPEHQEMLSASKCSFVSGLFPPLSEETAKSAKFSSIGSRFKLQLQQLMETLNHTEPHYIRCVKPNSLLKPGIFENMNVIQQLRSGGVLEAVRIKCAGFPTHRNFHEFLTRVRVLAPEVLRGNFEEKDSCKKILEKIGLTGYQIGETKIFLRAGQMAELDARRACLLSNSATVIQKQIKTHISRKTYNALRQSSIFVQSFCRGGLARRSYYHMKREAAATRIQTYMRGKLARKWYTEIRISAIVLQTGFRTMAVHDQFRYRKKTVASTRIQVRAVPVM 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi144g00063 848 Gene3D - 787 838 - -
Sebi144g00063 848 Gene3D - 737 786 - -
Sebi144g00063 848 ProSiteProfiles IQ motif profile. 785 809 IPR000048 GO:0005515
Sebi144g00063 848 ProSiteProfiles IQ motif profile. 760 789 IPR000048 GO:0005515
Sebi144g00063 848 Pfam IQ calmodulin-binding motif 739 757 IPR000048 GO:0005515
Sebi144g00063 848 Pfam IQ calmodulin-binding motif 787 805 IPR000048 GO:0005515
Sebi144g00063 848 Pfam IQ calmodulin-binding motif 762 780 IPR000048 GO:0005515
Sebi144g00063 848 Gene3D Kinesin motor domain 67 664 IPR036961 -
Sebi144g00063 848 ProSiteProfiles IQ motif profile. 737 764 IPR000048 GO:0005515
Sebi144g00063 848 SMART iq_5 784 806 IPR000048 GO:0005515
Sebi144g00063 848 SMART iq_5 759 781 IPR000048 GO:0005515
Sebi144g00063 848 SMART iq_5 736 758 IPR000048 GO:0005515
Sebi144g00063 848 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi144g00063 848 PRINTS Myosin heavy chain signature 484 512 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi144g00063 848 PRINTS Myosin heavy chain signature 431 459 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi144g00063 848 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi144g00063 848 PRINTS Myosin heavy chain signature 151 176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi144g00063 848 CDD MYSc_Myo11 78 722 IPR036018 -
Sebi144g00063 848 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 787 IPR027417 -
Sebi144g00063 848 FunFam Myosin heavy chain 254 309 - -
Sebi144g00063 848 PANTHER MYOSIN 56 840 - -
Sebi144g00063 848 FunFam Class V myosin 441 585 - -
Sebi144g00063 848 Pfam Myosin head (motor domain) 66 722 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi144g00063 848 SMART MYSc_2a 58 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi144g00063 848 Gene3D - 668 735 - -
Sebi144g00063 848 Gene3D - 254 312 - -
Sebi144g00063 848 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 10 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi144g00063 848 Gene3D Myosin VI head, motor domain, U50 subdomain 314 603 - -
Sebi144g00063 848 FunFam Myosin 2 314 427 - -
Sebi144g00063 848 Gene3D - 441 625 - -
Sebi144g00063 848 ProSiteProfiles Myosin motor domain profile. 64 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi144g00063 Sebi-Chr144 968636 984554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi144g00063 4 843 Myosins gene family AT1G08730 74.405 0.0 1347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi144g00063 K10357 - gmx:100803485 1514.21