Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi144g00060 ATGACTGGTTCTGGTTCTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGGAAATGTGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAGCAAGGTGCTACCCATTTTGCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCTCACCTCCCTGTTAGTGACCGTTGTGAAGCTGCTGTCACAATCTCATATGAAGCTCAAGCTAGACTTCAAGATCCTATTTATGGCTGTGTTTCCCATATTTTTGCTCTTCAACAACAGGTGGTTAATTTACAAGCACAGCTAGCTTATCTCAAAGAACAAGCAGCTCAGACTTGTTTCAATGCCTCTACCAATGAAAACTCTAATGAAAATTACTTTGACAAATCTACTACTGCTTTCACCCAAGATCTTCAGAGTTGGTTCCAGGGGGAAAATTCCAACCTGGGGCCAGAGTTTCTTCCTAACTTGTCTAATAATAATTCCTCAGCAACACAATATTATGGGAACAATAATACTCTCATGGATCTAAATCCTGTTGGGAATTATGGAAATTCAGGAGGAGGAGTCATGGAAGAAAGCAGCTCATTTTCTAGTTTTGATGAGAGTTCTAATTCCATGTCCTATGACATGCAAACAAACAGGAGAACATGGGGATTTGATGAAGTGGAAGACCTACATTCAGTGGCTTTTGGATACAGTTGA 708 0.411 MTGSGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLKEQAAQTCFNASTNENSNENYFDKSTTAFTQDLQSWFQGENSNLGPEFLPNLSNNNSSATQYYGNNNTLMDLNPVGNYGNSGGGVMEESSSFSSFDESSNSMSYDMQTNRRTWGFDEVEDLHSVAFGYS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi144g00060 235 Coils Coil 89 109 - -
Sebi144g00060 235 Pfam Lateral organ boundaries (LOB) domain 9 107 IPR004883 -
Sebi144g00060 235 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
Sebi144g00060 235 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi144g00060 Sebi-Chr144 882252 883194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi144g00060 9 234 AS2 family AT3G58190 52.193 1.42e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi144g00060 LOB 5.1e-36 No_clan