Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi144g00053 ATGGGTACCAACTTGCACCAACTACTCAAAAGCCTCTGTTTGAGTACTGATTGGAAGGTCTTGACATGGGAGGATGCTTACTATGACAATCCTGATCATTATGACACTTCCGAAAATAAGTACTGCCAGAAGACCTTGGAGCAGATTGGCAGTGGGGATTTTTCACATGACCCTCTAGGGTTAGTTGTGGCAAAGATGTCATATCATGTATATTCATTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAGCATCAGTGGATCTGTGTAGATAATCAAGTTACAAGTTCTAGCGCATCTTTTAAGGTGAGGATACTTCCTATTTTGATGATGCCACTAGCTTCTGCTCTCTGCTTTTCTGCTGATGGGTGGCAATCCCAGTTTTCTGCTGGAATTAGGACCATTGTTGTTGTAGCGGTAGTCCCACTTGGAGTTGTTCAGATTGGTTCGTTAAATAAGGTTATTGAAGATATGGGTGTTGTAACTCATATCAGAAGTCTCTTTTTGTCTACTCAAGATTACACTGTAGGCTATCTTCCTAGTCAAATACAAAGTGGTGTGAAGAATTCTTCATCTCTGGGGTTGCATGACCATAGGCATGTACATCTTTTCAGTTTTCACACACTAATAGAGCAAGTGCTGGATGTATCCACGAAAGCGTTGTCTTCAGAAATTATGCCTGCTCACTTGCATGATATAGAGAAAACCATGAAGAGTGAAACACTGGATATTTTAATGCCCTTCCAATGTCATGGGAAGAACTGTCCACCTCATACCGTTTATCATGAAATGGCTGTTGATGTGGCCAAGCATGAGGGACCTGAATTTAACAGTGCTGAAAGTTCGATTTTGCTTCAGTCAATGTCAAATATGATGAATGCAGAGCATCAGAAATTTGTAGGGATGAGGCCTGTAGATGAGAGGAAGTGTGAAGGGAACAATAATGGGTGCAAAGATACAAGTTTGAAATCAGAAAAAAATGTCTCATCATTTTTACACAATTTGGTCCTGGATAATAATAGCATGAGTCCATTAGAAAAAGTCGGAGTTGATCCTGCATGCTTCCCTTCAGACTTTCTTGATGCAGTTGCTTGTGAGAGTGATAAGTTACATTATGTAGATATCAATCAACAAGGGATGTTGAATGTGCCTAGACATTCAGATGCAAACTCCCAAAAAGATACTGAGAAGTCAAAGTTTCAGACTGAGTCTTGTTATGAGGATACCTCATATACATTGAAGTTCCCTGCTGGCTATGAGCTACATGAAGCACTTGGACCAGGTTTCCTGAACGGGAGTAGATATTTTGATTGGGAGGCACAAACAAATCAAGATGTTAAAACTGCTGAGATGTCAGATGAGATTAGCTGTAGCCAATTGACTTCTGAATCTCGTCCAGAGCATCTTTTGGAAGCAATGGTCACTAATGTTTGCCATAGTAATAATTGTGTTAATAGTGAGTCATCATTTTCTACATCAATGCAGACTGCAATGACCTCCGCAAGAAATCCTGAAACTTCCATTCATACTGTACACACTATTAATTCAGAAGGATATTCAATAGATCGACCCTCCAATGTTAGAGGGGACAAACAACAAAGTTTGAGTTCATCAGGGATATGCGGTGTGATGTCCCCAAAAGCTCTTTCTTCTACATGTCCTAGTTCTTCATGTTCCAAACAGTTTGAGAGGTATTCTGAACCAGGTAAAAACAGTAAGAAGAGGGCTAAGCCTGGGGAAAGTTGTAGGCCTAGGCCAAGGGACAGGCAGCTGATCCAAGACCGTATTAAGGAGTTACGAGAACTGGTTCCAAATGGAGCAAAGTGCAGTATTGATTCACTGCTGGAGTGCACAATAAAGCACATGCTCTTTCTCCAAAGCATAACTAAGCATGCCGACAAGCTAAATAAATATGCTGATTCAAAGACAAAGTTTCATCACATGGAAAAAGACATTCTAGGATCATCTGGTTATCAACAGGGTTCAAGTTGGGCAATGGAGGTAGGAGGCCATCTGAAAGTTCATTCAGTATTAGTGGAGAATCTTAGTAAGAACGGGCAGATGCTTGTTGAGATGCTGTGTGAGGAGTGCAGTCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTAGGCCTGACAATTTTGAATGGTGCAACAGAAGCTCATGGGCCAAAACAACAGAAATTTACACAGATTGGATATCTTGTGGCCGCTTGTTCAATTACTGCAATCCAAGAGCACAATGTATTCATGATATCCATTTGA 2271 0.4082 MGTNLHQLLKSLCLSTDWKVLTWEDAYYDNPDHYDTSENKYCQKTLEQIGSGDFSHDPLGLVVAKMSYHVYSLGEGIVGQVAVTGKHQWICVDNQVTSSSASFKVRILPILMMPLASALCFSADGWQSQFSAGIRTIVVVAVVPLGVVQIGSLNKVIEDMGVVTHIRSLFLSTQDYTVGYLPSQIQSGVKNSSSLGLHDHRHVHLFSFHTLIEQVLDVSTKALSSEIMPAHLHDIEKTMKSETLDILMPFQCHGKNCPPHTVYHEMAVDVAKHEGPEFNSAESSILLQSMSNMMNAEHQKFVGMRPVDERKCEGNNNGCKDTSLKSEKNVSSFLHNLVLDNNSMSPLEKVGVDPACFPSDFLDAVACESDKLHYVDINQQGMLNVPRHSDANSQKDTEKSKFQTESCYEDTSYTLKFPAGYELHEALGPGFLNGSRYFDWEAQTNQDVKTAEMSDEISCSQLTSESRPEHLLEAMVTNVCHSNNCVNSESSFSTSMQTAMTSARNPETSIHTVHTINSEGYSIDRPSNVRGDKQQSLSSSGICGVMSPKALSSTCPSSSCSKQFERYSEPGKNSKKRAKPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQSITKHADKLNKYADSKTKFHHMEKDILGSSGYQQGSSWAMEVGGHLKVHSVLVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILNGATEAHGPKQQKFTQIGYLVAACSITAIQEHNVFMISI 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi144g00053 756 MobiDBLite consensus disorder prediction 518 538 - -
Sebi144g00053 756 MobiDBLite consensus disorder prediction 552 567 - -
Sebi144g00053 756 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 578 627 IPR011598 GO:0046983
Sebi144g00053 756 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 728 IPR043561 GO:0003700|GO:0006355
Sebi144g00053 756 MobiDBLite consensus disorder prediction 552 590 - -
Sebi144g00053 756 MobiDBLite consensus disorder prediction 568 590 - -
Sebi144g00053 756 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 170 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi144g00053 Sebi-Chr144 779359 785117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi144g00053 1 727 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.159 2.48e-129 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi144g00053 - - gmx:100777740 997.653