Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi144g00049 ATGAGAAAATCCTCAAAGGCATCTTCTTCCTCTCCATCATCCAAATCCGAGAAGAAGCCCCATCTTCGAAGCTCCAAAGCCCAATGGCCAGAGACCCCAGAGAAGCTACCACAGCGCTCGCGCAACCGCGGCGTCGCGCTCTCCGTTGCGGAGATTAGGAAAGTTGCCGAGGGTTTGCAGGATCCGAAGCAACGCCGTGAAACGACGTCGTCGCAAGCCAAAACGGCAAGGAGGCAGATCGCATTGCCTTCCCCATGTAAACCCAAGACTGTTACTGATGAACCCTCCAAGCTTCCAGAAAAGTATGAAATTTTGGGCGAGTTCTTCGACAGCTTGGATAGTTCGATTCGATTATTGCGTTTGAAAGGGTCGATGCCATCTTTCACAAATATCAGTCCCAAGATTGAATGTTTAACTGATAGGAGGTTTACACATGGTCATCTGGCCCAGTTGAAATTCATCTTACCTGATGCAATTGAAATTAAGAAGTTACTTGTGTTTGACGAACGGACAAGTTGTATGAAGCCAGATCTTCATGTTACTATAAACCTTGATGCAGTAGAGTCTGATGCAAAGTTGCTCCCTGAACGTGGGACTGGGTCGCTGAGGAAGTTATTTCGCACACGGCTTAGAGATTTTTGTAAATCTCATCCTGAGGGTGATGAAATTCCAGAGGAAATACTGCCTGAGCCATTCAATCGCCCAAAGCAAGACCGTTTATTGAACTTATTGAAAACTCCCTCATCATTATCTAAGGAGGCATTATCAGATGCATCTGTGACACATTCTCCCGCACCTTTATCAGCATGCTTGCAGAATAATGACATTGCAGATAATACAGATTCGGCTAGCATAGAAAAGAACTTGTCAGATAATACAGATTCTGCTAACCAGCAACTAGCAGTAGCCTCTCATATGTCTAAAGCTTTTACAAGGCGGTTTTCTCAGAAATCTAAGGAAAATGGAGCAGATAATGCACAGCATAAATGTCAATCAGATTCTTTCCAACCGTTGGCTTTTCCAGTTTCAGAGTCAAGCCTGAAGGAAAATTGCTCTTATGAGAGCACTGAATCAAAACCCAAAGCATGCTCATCTGAGATAGCTTCAGAAGCAGCCAGTAGTGGTTTATGCCCAACAGTTTGTGCTTCTTCAAATTGCTTCACATCATCCAGTGCTCCACCTGCTACTCCAAGCAAAACCATTGAGTATACAGAAAACAAAGATGGGTCTCTCAAAAGCATCAATGCCACATCAACTCCGGCTAAACTTGTGTGTACTCCATCCAGACTGATGTCTGCCACTCCTGCATTGCCTGCACCTAAAAGAGCTTGCATGAGTCCTGATGACAACGCTACCAGTTCACTGAACAAGTTGGTTAGACGTCCACCTCGTACAAGATCATTGAAATTTGACACTCCAGTGAAAAATGAAGATGTTGTCGGTAGCTTGTCAATTGATGATGATATTTTTGATATCCTGCCAGAGAATCTACTCCAATCGATTATGGAAAAAGAAAGAATAGCAAAGGAGGAAAGTGAAGTTGAAGAACAGCTGCATTTGTTGCTAGAACTAGTACCGGATTGGATTTCTGAGAAGTTAGCCTCTAGTGGGGATTTCCTATTCTGCATAAATAAAATGTTGAACCCTGAAACCGTACGAGCATCACTTGAAGAAGCAAAATGA 1683 0.4361 MRKSSKASSSSPSSKSEKKPHLRSSKAQWPETPEKLPQRSRNRGVALSVAEIRKVAEGLQDPKQRRETTSSQAKTARRQIALPSPCKPKTVTDEPSKLPEKYEILGEFFDSLDSSIRLLRLKGSMPSFTNISPKIECLTDRRFTHGHLAQLKFILPDAIEIKKLLVFDERTSCMKPDLHVTINLDAVESDAKLLPERGTGSLRKLFRTRLRDFCKSHPEGDEIPEEILPEPFNRPKQDRLLNLLKTPSSLSKEALSDASVTHSPAPLSACLQNNDIADNTDSASIEKNLSDNTDSANQQLAVASHMSKAFTRRFSQKSKENGADNAQHKCQSDSFQPLAFPVSESSLKENCSYESTESKPKACSSEIASEAASSGLCPTVCASSNCFTSSSAPPATPSKTIEYTENKDGSLKSINATSTPAKLVCTPSRLMSATPALPAPKRACMSPDDNATSSLNKLVRRPPRTRSLKFDTPVKNEDVVGSLSIDDDIFDILPENLLQSIMEKERIAKEESEVEEQLHLLLELVPDWISEKLASSGDFLFCINKMLNPETVRASLEEAK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi144g00049 560 Gene3D - 492 560 IPR038090 -
Sebi144g00049 560 MobiDBLite consensus disorder prediction 1 95 - -
Sebi144g00049 560 MobiDBLite consensus disorder prediction 1 15 - -
Sebi144g00049 560 PANTHER DNA REPLICATION FACTOR CDT1 511 560 IPR045173 GO:0003677|GO:0030174|GO:0071163
Sebi144g00049 560 SMART CDT1_2 98 230 IPR014939 -
Sebi144g00049 560 CDD Cdt1_m 97 236 IPR014939 -
Sebi144g00049 560 MobiDBLite consensus disorder prediction 56 72 - -
Sebi144g00049 560 SUPERFAMILY "Winged helix" DNA-binding domain 95 232 IPR036390 -
Sebi144g00049 560 Pfam DNA replication factor CDT1 like 98 188 IPR014939 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi144g00049 417 558 Core DNA Replication Machinery Family AT2G31270 34.579 6.94e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi144g00049 K10727 - gmx:100778818 502.671