Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi144g00033 ATGACTTCCCCTTATTTCTTTGAGAACTCATCCGATTGGGAAATGGTGCTGCAGTCTTCAGAAATTTCGTTCCAATCATTTTCAACCAATCATGATTCTCTGTCCTTTAATATGGTTGTTGACTTTTCCATGGCTACAACAGAAGGAAACACCAATGAAGAAGCAAAGCAATTGGTGAAGAAGTCAGAAGCCAAAACATCAATGCAGATGCTGAATAATAGCAATAAGGAAATGTCATATATAGGAGTGAGGAAAAGGCCTTGGGGAAAATTTGCAGCAGAGATCAGAGATACAACAAGGAATGGCGCCAGGGTATGGCTTGGAACCTTTGACAATGCAGAGGCTGCTGCTTTAGCTTATGACCAAGCTGCTTCTCCATGA 381 0.4147 MTSPYFFENSSDWEMVLQSSEISFQSFSTNHDSLSFNMVVDFSMATTEGNTNEEAKQLVKKSEAKTSMQMLNNSNKEMSYIGVRKRPWGKFAAEIRDTTRNGARVWLGTFDNAEAAALAYDQAASP 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi144g00033 126 PRINTS Ethylene responsive element binding protein signature 80 91 IPR001471 GO:0003700|GO:0006355
Sebi144g00033 126 PRINTS Ethylene responsive element binding protein signature 103 119 IPR001471 GO:0003700|GO:0006355
Sebi144g00033 126 Pfam AP2 domain 80 124 IPR001471 GO:0003700|GO:0006355
Sebi144g00033 126 ProSiteProfiles AP2/ERF domain profile. 79 126 IPR001471 GO:0003700|GO:0006355
Sebi144g00033 126 SUPERFAMILY DNA-binding domain 80 124 IPR016177 GO:0003677
Sebi144g00033 126 Gene3D AP2/ERF domain 79 125 IPR036955 GO:0003700|GO:0006355
Sebi144g00033 126 SMART rav1_2 79 125 IPR001471 GO:0003700|GO:0006355
Sebi144g00033 126 CDD AP2 80 114 IPR001471 GO:0003700|GO:0006355
Sebi144g00033 126 PANTHER DNA-BINDING DOMAIN 43 124 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi144g00033 Sebi-Chr144 515354 515734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi144g00033 75 124 AP2-EREBP Transcription Factor Family AT2G31230 84.000 2.10e-25 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi144g00033 AP2 1.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi144g00033 K14516 - gmx:100811486 127.102