Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi144g00032 ATGGTTGACTTGGACTTCTCCAAGGACTCAACAGAAGCAAAGCAATTGGTGAAGATGACTGAAGCTAAAACATCAGCGCAGATGCAGAGTAATAATGAGAATAATAACAAGAAGGAAAGGTCGTCATATATAGGAGTGAGGAAGAGGCCTTGGGGAAAATTTGCAGCAGAGATCAGAGATACCACAAGGAACGGTGCTAGGGTATGGCTTGGAACCTTTGACACTGCAGAGGCTGCTGCTTTAGCTTATGACCAAGCTGCTTTTTCCATGAGAGGCCATAACGCTGTTCTCAATTTTCCAGTCAAAATGGTCAAAGAATCTCTGCAAGAGATCCAATATGATTGCAGTACCAACAGTTGTTCACCTGCACTTGCACTCAAGGAGAGGCACTGCATCCAAAGAAAATTGTCTTCATCAATAGCTAGAAAGGGTAAAGGGAAATTACAGGTATTAGAAGCACCAAGACCAAATGTGTTGGTATTAGAGGACTTGGGAGTTGAGTATCTGGAGCAACTTCTAACCATATCCGATCAAACTGCAACCACTAGTACTAGCTACTTCAAGTAA 567 0.4268 MVDLDFSKDSTEAKQLVKMTEAKTSAQMQSNNENNNKKERSSYIGVRKRPWGKFAAEIRDTTRNGARVWLGTFDTAEAAALAYDQAAFSMRGHNAVLNFPVKMVKESLQEIQYDCSTNSCSPALALKERHCIQRKLSSSIARKGKGKLQVLEAPRPNVLVLEDLGVEYLEQLLTISDQTATTSTSYFK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi144g00032 188 Gene3D AP2/ERF domain 42 103 IPR036955 GO:0003700|GO:0006355
Sebi144g00032 188 MobiDBLite consensus disorder prediction 20 42 - -
Sebi144g00032 188 FunFam Ethylene-responsive transcription factor 2 41 101 - -
Sebi144g00032 188 CDD AP2 41 101 IPR001471 GO:0003700|GO:0006355
Sebi144g00032 188 SMART rav1_2 42 106 IPR001471 GO:0003700|GO:0006355
Sebi144g00032 188 Pfam AP2 domain 42 93 IPR001471 GO:0003700|GO:0006355
Sebi144g00032 188 PANTHER DNA-BINDING DOMAIN 21 177 IPR044808 GO:0003700|GO:0009873
Sebi144g00032 188 SUPERFAMILY DNA-binding domain 41 102 IPR016177 GO:0003677
Sebi144g00032 188 PRINTS Ethylene responsive element binding protein signature 66 82 IPR001471 GO:0003700|GO:0006355
Sebi144g00032 188 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Sebi144g00032 188 ProSiteProfiles AP2/ERF domain profile. 42 100 IPR001471 GO:0003700|GO:0006355
Sebi144g00032 188 MobiDBLite consensus disorder prediction 20 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi144g00032 Sebi-Chr144 492107 492673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi144g00032 4 181 AP2-EREBP Transcription Factor Family AT3G23240 45.946 3.01e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi144g00032 AP2 1e-15 CL0081