Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi144g00031 ATGGAATTTGATTCTTCTTTCTTCCAATACCAATACCAATACCAAAACTCTGCTTTTGCAAACTCCTCTGTTTCTGCAGAGTCTTTCTCTTGGGAGGACTTCTTTTTCTTCAATGAAGACAACACCACCCTTCCTCCCTTTAACTTCACTGATGACCACTCATCACAAATCAAGGAATCATCTTTGGATTCCAACACTTCAGGCTCTCTAGTTAGCACTGAATCACAAGAAGTCTCCTCCAATAATTCAAATCATATCCAAGTCAAAGAAACAGATCATGCATTATCACCACCCAAGGAGGAGGAAAGTAGTAATAACAGAGAGAAGAGGCCTTACAGAGGAGTGAGGAGAAGGCCATGGGGAAAATTTGCTGCAGAGATAAGGGACTCAACAAGAAATGGGGTTAGAGTGTGGATTGGCACATTTGACACTGCTGAAGCAGCTGCTTTAGCTTATGATCAAGCAGCTTTGTCCACAAGAGGTTCCATGGCAGTGCTGAATTTCCCAGAGGAAGTGGTGAGGGAGTCACTCAAAGACATGGTCAACAAGCCATGGGAAGATGGTTCCTCTCCTGTGTTAGCACTCAAGAGGAAGCACACAATGAGAAGAAAGTCCAAAACCACTAACAAAAAGACCAAAAGGGAGAGCACTAGCAGGGAGTTAGAGATGCTTTCACAAAATGTGCTGGTTTTGGAGGATTTGGGTTCTGAATATCTAGAACAACTTCTGAGCTTGACTTCTTCTGAATTGCCATTTTAG 759 0.4282 MEFDSSFFQYQYQYQNSAFANSSVSAESFSWEDFFFFNEDNTTLPPFNFTDDHSSQIKESSLDSNTSGSLVSTESQEVSSNNSNHIQVKETDHALSPPKEEESSNNREKRPYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALSTRGSMAVLNFPEEVVRESLKDMVNKPWEDGSSPVLALKRKHTMRRKSKTTNKKTKRESTSRELEMLSQNVLVLEDLGSEYLEQLLSLTSSELPF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi144g00031 252 MobiDBLite consensus disorder prediction 92 110 - -
Sebi144g00031 252 MobiDBLite consensus disorder prediction 47 114 - -
Sebi144g00031 252 MobiDBLite consensus disorder prediction 198 219 - -
Sebi144g00031 252 PANTHER DNA-BINDING DOMAIN 69 244 IPR044808 GO:0003700|GO:0009873
Sebi144g00031 252 Pfam AP2 domain 112 161 IPR001471 GO:0003700|GO:0006355
Sebi144g00031 252 SMART rav1_2 111 175 IPR001471 GO:0003700|GO:0006355
Sebi144g00031 252 PRINTS Ethylene responsive element binding protein signature 112 123 IPR001471 GO:0003700|GO:0006355
Sebi144g00031 252 PRINTS Ethylene responsive element binding protein signature 135 151 IPR001471 GO:0003700|GO:0006355
Sebi144g00031 252 CDD AP2 112 170 IPR001471 GO:0003700|GO:0006355
Sebi144g00031 252 SUPERFAMILY DNA-binding domain 112 170 IPR016177 GO:0003677
Sebi144g00031 252 ProSiteProfiles AP2/ERF domain profile. 111 169 IPR001471 GO:0003700|GO:0006355
Sebi144g00031 252 Gene3D AP2/ERF domain 111 171 IPR036955 GO:0003700|GO:0006355
Sebi144g00031 252 FunFam Ethylene-responsive transcription factor 2 110 170 - -
Sebi144g00031 252 MobiDBLite consensus disorder prediction 47 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi144g00031 Sebi-Chr144 429023 429781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi144g00031 104 244 AP2-EREBP Transcription Factor Family AT3G23240 62.411 7.93e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sebi144g00031 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi144g00031 K14516 - gmx:100784784 292.737