Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi144g00015 ATGGGTCTTAAAGACGTTGGTGCTTCATTGCCTCCTGGGTTTCGATTTTATCCGAGTGATGAGGAATTGGTCCTTCACTACCTTTACAAAAAGATCACAAATGAGGAAGTTCTGAAGGGTACCTTGGTGGAAATTGACTTGCACACTTGCGAGCCATGGCAGCTTCCTGAGATGGCTAAGCTCAATGCAACAGAATGGTACTTCTTCAGCTTTCGTGACCGCAAATATGCAACTGGCTATCGGACCAATCGTGCCACGACATCTGGCTATTGGAAAGCAACAGGGAAAGATCGTACGGTGTTTGATCCAATCACGCGTGAGGTTGTGGGAATGAGAAAAACTTTGGTGTTCTATAGGAACAGAGCTCCCAATGGCATCAAAACCGGTTGGATCATGCATGAGTTTCGCTTGGAGACCCCACACATGCCCCCTAAGGAGGACTGGGTTTTGTGTAGAGTATTTCACAAAGGCAAAGCAGACGACAACAGTAATGCCAAACTCATGTTTGAGAGCATAACTCCATCCCTAACTTTGGCTTCATCATCCCCAACCATGCCAGTTGGGTATAACCAACTTCCCCCTTTCTCTTCCTCAATTCATCACCCAAACCAAAATAACTCTTTCATCAATCTCCTTCACTTCTCTCATCAAGAAACTAATAATAGTAGTGTTACTCAAATTAGCCCCAAATGTGACGATGGATATGGCTTCTTATGGGACATGGATCTCGAAGAAAATAGCGCCTTCCAAGATGGAATGAGATTCGAGGTTGATAATAATAATAATAGCATGGTGTTGTTGTAA 804 0.4391 MGLKDVGASLPPGFRFYPSDEELVLHYLYKKITNEEVLKGTLVEIDLHTCEPWQLPEMAKLNATEWYFFSFRDRKYATGYRTNRATTSGYWKATGKDRTVFDPITREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKADDNSNAKLMFESITPSLTLASSSPTMPVGYNQLPPFSSSIHHPNQNNSFINLLHFSHQETNNSSVTQISPKCDDGYGFLWDMDLEENSAFQDGMRFEVDNNNNSMVLL 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi144g00015 267 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Sebi144g00015 267 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Sebi144g00015 267 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 215 - -
Sebi144g00015 267 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Sebi144g00015 267 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi144g00015 Sebi-Chr144 187736 192377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi144g00015 9 173 NAC Transcription Factor Family AT1G76420 56.548 3.72e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi144g00015 NAM 1.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi144g00015 - - gmx:100783645 431.024