Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi144g00006 ATGATGAAAGTTGGATTTGAAGTCCTTCATGCAAATCCAAACATGATTCGTCCCCACATGCATGAAACCTGGGACTACCCAAATATTGCTGATTTGCAAGCTCCAATTCCAACCCCATCAAATCAATATCCAAAGCCACCAACTGAAAACCACTACCTAAACTTGGGGCAGAATGAGGTCTGTGATTGGGTGGAAAACATTTCCAAACACCTTGTTGAAGACATACCAGAAACCACTTCTGATAATAACAACTTGCTATCCAATACCCCAATAACAAGGGCTTCCCATGACAACCTTTTTCCCTCACTTTCACCCAATTTCAACCCTCACATTCAATCAAACACCTTAGATTTTGATCATAACAACGATAATGTTTATGATCATGGGTTAAACCTGATAACCCTTCTAATGGAATGTGCAGTGGCAATCTCTGTGGACAACCTTGGTGAGGCTCACAGAATGTTACTAGAGATAACACAATTAGCCTCACCTTATAAACCATCATGTGCAGAACGTGTTGTTGCTTATTTTGCAAAGGCCATGACTAGCAGGGTAATGAATTCATGGCTTGGTGTATGTTCCCCTTTAATTGATCAAAGGAACATTCACTCATCATTCCAAGTTTTCAACAACATTTCCCCTTTCATAAAGTTTGCTCATTTCACTTCCAACCAAGCCATCCTTGAAGCAGTGAACCGAACTAACAGCATTCACATCATTGATTTAGACATCATGCAGGGGCTTCAATGGCCACCCTTTTTCCACATACTTGCCACAAGAATGGAGGGTCCACCAGAGGTTAGAATGACAGGCATGGGAACCTCAATGGAACTCCTTGTTGAAACAGGAAAACAGCTTTCCAACTTTGCAAGAAGGTTAGGATTGTCCTTCAAGTTCAACCCTGTTGCAACCAAATTTGGGGAAATTGATGTTTCCATGGTGCAAGTGAGGCATGGTGAGACACTTGCAGTGCATTGGTTGCAGCATTCTTTGTATGATGCAACTGGACCTGATTGGAAAACATTGAGGCTTCTTGAGGAGTTGGAGCCAAAAATCATAACTTTGGTAGAACAGGATGTGAACCATGGAGGGCCTTTCTTAGACCGTTTTGTTGGCTCCTTGCACTATTACTCTACCCTTTTTGATTCTCTTGGAGCATATTTGCATAGTGATGATTCTAGCAGGCACAGTGTGGAGCATGGCCTTCTCTCTAAGGAGATCAATAATATATTGGCCATAGGAGGCCCTGCAAGGAGTGGAGAGGACAAGTTTAGGCAATGGAGAAGTGAGCTTGCAAGACATTGTTTTGTGCAGGTTCCAATGAGTGCAAATTCAATGGCACAAGCACAGTTGATATTGAACATGTTTTCACCAGCTCATGGGTATAGCCTTGCACAAGTTGATGGCACATTAAGGTTTGGATGGAAGGATACCAGTTTATATACAGCTTCTGCATGGACCTCTAGTACTTCTAGGTAG 1479 0.4233 MMKVGFEVLHANPNMIRPHMHETWDYPNIADLQAPIPTPSNQYPKPPTENHYLNLGQNEVCDWVENISKHLVEDIPETTSDNNNLLSNTPITRASHDNLFPSLSPNFNPHIQSNTLDFDHNNDNVYDHGLNLITLLMECAVAISVDNLGEAHRMLLEITQLASPYKPSCAERVVAYFAKAMTSRVMNSWLGVCSPLIDQRNIHSSFQVFNNISPFIKFAHFTSNQAILEAVNRTNSIHIIDLDIMQGLQWPPFFHILATRMEGPPEVRMTGMGTSMELLVETGKQLSNFARRLGLSFKFNPVATKFGEIDVSMVQVRHGETLAVHWLQHSLYDATGPDWKTLRLLEELEPKIITLVEQDVNHGGPFLDRFVGSLHYYSTLFDSLGAYLHSDDSSRHSVEHGLLSKEINNILAIGGPARSGEDKFRQWRSELARHCFVQVPMSANSMAQAQLILNMFSPAHGYSLAQVDGTLRFGWKDTSLYTASAWTSSTSR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi144g00006 492 ProSiteProfiles GRAS family profile. 123 487 IPR005202 -
Sebi144g00006 492 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 99 483 IPR005202 -
Sebi144g00006 492 Pfam GRAS domain family 132 487 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi144g00006 Sebi-Chr144 93335 94813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi144g00006 109 487 GRAS Transcription Factor Family AT3G54220 53.827 1.71e-140 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi144g00006 GRAS 3.3e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi144g00006 - - gmx:100775656 779.63