Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi143g00012 ATGGAGAAAGTTATAGGAGCTTCCTATGGTATAGCAAAGAGTTGTGTGGGGATGGGTTCGATAGGTGTGATGAGACCAAAGCTGGTGAAGTCTACCTTCCATGTTGTTATGGTTGGAGTTTTGGGTATTTATGGACTTATTATTGTTGTCATGATCAGTACTGGTATTAACCCCAAGGCCAAATTTGATTACTTCTTTGATGGTTATGCCCATGTCTCCTATGGTCTTACCCATGCTGGCTAG 243 0.4198 MEKVIGASYGIAKSCVGMGSIGVMRPKLVKSTFHVVMVGVLGIYGLIIVVMISTGINPKAKFDYFFDGYAHVSYGLTHAG 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi143g00012 80 NCBIfam V-type ATPase subunit C 4 77 IPR011555 GO:0033179|GO:0046961|GO:1902600
Sebi143g00012 80 Gene3D - 1 79 IPR035921 -
Sebi143g00012 80 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi143g00012 Sebi-Chr143 436283 436525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi143g00012 5 77 Primary Pumps ATPases(2) AT4G38920 71.622 8.83e-29 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi143g00012 K02155 - qsa:O6P43_033634 101.679