Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi142g00044 ATGTCTCCGACGCCGGGATTCCACGTCCCACTCTTGCCGGAATCCAAAGCATCGGCGCATGAGCCGGCCTCCGTCTCCGGCGCCGTCTTCAACGTCGCCACGAGCATAGTCGGCGCCGGAATCATGTCAATCCCGGCAATCCTGAAGGTTCTCGGCGTGATTCCAGCTTTCGCCATGATTCTGATCGTGGCCGTGCTGGCAGAAGTTTCCGTGGACTTCCTCATGCGGTTCACGCATTCCGGTGAAACGACGACGTATGCTGGAGTCATGAGGGAGGCGTTTGGGCCACCAGGAGCACTAGCGGCTCAAGTTTGCGTCATAATCACCAACCTTGGGGGGGATGTGCTCTCTGGGAAGCAAAGTGGAGGTGAAGTGCACTTGGGAATTTTGCAACAGTGGTGTGGATTTCACTGGTGGACTTCTCGGGAATTTGCTCTGTTTTTCACTTTGGTCTTTGTTATGCTTCCATTGGTCTTCTACCGTCGTGTAGAGTCCTTGAAGTACAGCTCTGCAATATCAACTCTTCTTGCTGTGGCATTTGTTGCAATATGCTCTGGGTTGGCTATTGTTGCTTTGGTGCAAGGGAAAACACAAACTCCTAGATTGTTTCCTCAGTTTGACTACCAAACCTCATTCTTTGATTTGTTCACTGCAGTTCCTGTTGTTGTCACAGCCTTTACATTTCATTTTAATGTGCATCCGATTGGGTTTGAGCTTGCCAAGCCATCTGATATGACAACAGCTGTTCGATTAGCATTGTTGCTTTGTGCTGTTATTTACTCTACAATAGGTCTATTTGGGTACCTGTTATTTGGGGATTCAACCCAATCAGACATTCTCATCAATTTTGATCAGAATACTGATTCTGCAGTTGCTTCGTTTTTCAATAGTTTAATCCGTGTAAGCTATGCACTCCATATCATGCTGGTATTCCCTCTAGTGAACTTCTCTTTGAGAGCCAACATAGATGAATTACTCTTCTCCAAGAAGCCTCTGCTAGCCACCGACAACAAAAGATTTGTGATCCTTTCCCTGGTGCTGCTAGTCTTTTCCTACCTTGCAGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAATTTCTGGGATCATCATCTGCAGTGTGCCTTGCTTTCATTTTCCCTGGCATTATTGTTTTAAGGGATGCTCCAGGTATATCATCAAGAAGGGAAAAAATTGTAGCATTGATTATGATTATACTAGCTGTAGTTACTAGTGTGATTGCCATTTCCACCAACATATACAATGCTTTAAGTAGCAAATCATAA 1287 0.4553 MSPTPGFHVPLLPESKASAHEPASVSGAVFNVATSIVGAGIMSIPAILKVLGVIPAFAMILIVAVLAEVSVDFLMRFTHSGETTTYAGVMREAFGPPGALAAQVCVIITNLGGDVLSGKQSGGEVHLGILQQWCGFHWWTSREFALFFTLVFVMLPLVFYRRVESLKYSSAISTLLAVAFVAICSGLAIVALVQGKTQTPRLFPQFDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKPSDMTTAVRLALLLCAVIYSTIGLFGYLLFGDSTQSDILINFDQNTDSAVASFFNSLIRVSYALHIMLVFPLVNFSLRANIDELLFSKKPLLATDNKRFVILSLVLLVFSYLAAIAIPDIWYFFQFLGSSSAVCLAFIFPGIIVLRDAPGISSRREKIVALIMIILAVVTSVIAISTNIYNALSSKS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi142g00044 428 PANTHER AMINO ACID TRANSPORTER 14 411 - -
Sebi142g00044 428 Pfam Transmembrane amino acid transporter protein 23 415 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi142g00044 Sebi-Chr142 1022271 1024112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi142g00044 4 422 Amino Acid or Auxin Permease AAAP Family AT3G56200 58.140 7.70e-176 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi142g00044 - - gmx:100813056 686.026