Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi142g00029 ATGAGGGGAGAGGAGGAAGACGCGCTACGTGGACCGCGCAATGGCTTGTCTGTAGGGGCGGGGGTGTATGGGCCCAGCATTCTCCCCACCCTCAATCTCGCCGGCGACGTCGTTATCGCCGAGCATCTCTCTCCGCGCCTCGGGAACCTCGGCCATGGAGACTTGGTTCTGGTGCGGTCCCCTTTGAACCCTAATCGGAGCTTGACCAACTGCATCGTCGCCATGAAAGGAGACACAGTCACTTACTTCGACCCTTTGCACGCTGATGCTGCTCAAGTTGCAGTGATGTGTGTGCTTAATGGTTTGTTCTTCGTTTTCTCTTATTGA 327 0.5627 MRGEEEDALRGPRNGLSVGAGVYGPSILPTLNLAGDVVIAEHLSPRLGNLGHGDLVLVRSPLNPNRSLTNCIVAMKGDTVTYFDPLHADAAQVAVMCVLNGLFFVFSY 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi142g00029 108 CDD S26_SPase_I 22 78 IPR019533 GO:0004252|GO:0006465
Sebi142g00029 108 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 22 91 - -
Sebi142g00029 108 Pfam Signal peptidase, peptidase S26 24 83 IPR019533 GO:0004252|GO:0006465
Sebi142g00029 108 Gene3D Umud Fragment, subunit A 20 106 - -
Sebi142g00029 108 SUPERFAMILY LexA/Signal peptidase 22 83 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi142g00029 Sebi-Chr142 634225 634638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi142g00029 27 105 MADS-box Gene Family AT1G29960 35.000 8.84e-12 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi142g00029 K09647 - gmx:100527597 114.775