Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi142g00017 ATGGCTGGAAATTCCCCATGTGCTTCATGCAAGCTGCTGAGACGCCGTTGCGCCAAAGATTGCATCTTTGCTCCTTATTTCCCTTCTGATGATCCTCAAAAGTTCGCCATAGTTCACAAGGTTTTTGGTGCTAGCAACGTTAGCAAAATGCTGCAGGAACTTCCGGTTCATCAGAGAGCAGATGCAGTAACAAGTCTAGTGTATGAAGCACATGCAAGGGTGAGAGACCCTGTGTATGGTTGTGTTGGAGCCATATCTTACCTTCAAAACCAGGTCTCTGAGCTTCAAATGCAGCTTGCAGTGGCTCAAGCAGAGATACTCTGCATCCAGATGCAACATGAACCTGTAATACCAAATCCAGAAATGGACTTAGATCACAAATCATACTTTCTCCAAAATGACCCCCCTCAATACCTCAACTTTGCATCTTCAAGCAATGTAATTCATGATTCTCTCTCAAGAGAGAGCATATTTGGACATGACGTGGTTTCTTGA 495 0.4424 MAGNSPCASCKLLRRRCAKDCIFAPYFPSDDPQKFAIVHKVFGASNVSKMLQELPVHQRADAVTSLVYEAHARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQHEPVIPNPEMDLDHKSYFLQNDPPQYLNFASSSNVIHDSLSRESIFGHDVVS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi142g00017 164 Coils Coil 85 105 - -
Sebi142g00017 164 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 125 - -
Sebi142g00017 164 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Sebi142g00017 164 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi142g00017 Sebi-Chr142 379276 380242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi142g00017 3 131 AS2 family AT2G30130 83.459 1.63e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi142g00017 LOB 1.4e-42 No_clan