Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi141g00078 ATGAATTCAGTGAAGGATGTTGTACCTTTTCTTGGTAGCTCTTCATCAGCTTCTTCAGTTGCTGATGTAAGTCAAGTTCTTAATTACGTGATGGCAAAAATTGAACTTCATGTAAAGCAAGGAGAACCAACTCGAGTTCAGCCTGCAGAGGAAACAGAAAAAGGGCTTTACTTTCTTTCAAACCTTGACCAGAATATTGCAGTTCCAGTTCGCACGGTTTATTGCTTCAAATCATCTTCCAGAGGAAATGAGGATGCTGCACAAGTTATTAAGGATGCCTTATCAAAGATTCTTGTTCCTTATTATCCTATGGCAGGCAAGTTGATGATTAGCACAGAAGGGAAGTTGATAGTGGATAACACAGGGGAGGGTGCTGTATTTGTTGAGGCTGAAGCAGATTGCAACATAGAAGACATTGGGGACTTAACAAAGCCTGACCCTGATACTCTTGAGAAACTGGTTTATGACACCCCTGGTGCTCAGAACATACTTGAGATGCCTCTTATGGCAGTTCAGGTGACAAAATTCAAATGTGGGGGATTCACTTTGGGGCTAAACATGATTCATTGCATGAAAGATGGACTATGTGCCATGGAGTTTGTGAATGCATGGAGTGAGGCAGCTAGAGGGTTGGACTTAAAGATTCAACCATTTCTTGATCGAACCATAATCAAAGCACGTAGCCCTCCTAAAATAGAGTTTCAACACCATGAATTTGATGAAATTGAAGATATATCAAATACTAAAAAACTTTATGAAGAAGAAAAGATGCTCTACAGGTCCTTCTGTTTCAATCATGAGAAGCTTGAATTGCTTAAGAAAAAGGCCACTGAAGATGGGGTAATAGAAAAGTGCTCTACTTTTGAAGCCCTCTCAGGTTTTGTATGGAGAGCTCGAACTGAAGCCTTAAAGATGCATCCTGATCAACAAACAAAGCTACTCTTTGCAGTTGATGGAAGGTCAAGATTTGTGCCCCCAATACCAGAAGGATACTTTGGCAATGCTATAGTGCTGACAAATTCCCTGTGTAAGGCAGGTGAACTATTGAATAATCCTCTGTCATTTACAGTGGGATTGATTCGCAAGGCAATTGACATGGTCACAGATAGTTATATGAGATCTGCTATTGATTATTTTGAAGTCAAAAGAGCTAGGCCTTCCTTAACAGCCACCCTATTGATCACAACTTGGACTAGGCTATCTTTCCACACTACAGACTTTGGTTGGGGAGAACCTTTATGTTCTGGTCCTGTGACCTTGCCAGAGAGAGAAGTTATTTTGTTCTTATCACACGGTCAAGAAAGGAAAAGCATAAATGTGCTCCTGGGTTTACCTGCTTCTGCCATGGAATTTTTTGAAGCACTGATGATGCAAGTGTGA 1380 0.408 MNSVKDVVPFLGSSSSASSVADVSQVLNYVMAKIELHVKQGEPTRVQPAEETEKGLYFLSNLDQNIAVPVRTVYCFKSSSRGNEDAAQVIKDALSKILVPYYPMAGKLMISTEGKLIVDNTGEGAVFVEAEADCNIEDIGDLTKPDPDTLEKLVYDTPGAQNILEMPLMAVQVTKFKCGGFTLGLNMIHCMKDGLCAMEFVNAWSEAARGLDLKIQPFLDRTIIKARSPPKIEFQHHEFDEIEDISNTKKLYEEEKMLYRSFCFNHEKLELLKKKATEDGVIEKCSTFEALSGFVWRARTEALKMHPDQQTKLLFAVDGRSRFVPPIPEGYFGNAIVLTNSLCKAGELLNNPLSFTVGLIRKAIDMVTDSYMRSAIDYFEVKRARPSLTATLLITTWTRLSFHTTDFGWGEPLCSGPVTLPEREVILFLSHGQERKSINVLLGLPASAMEFFEALMMQV 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi141g00078 459 Gene3D - 32 240 IPR023213 -
Sebi141g00078 459 FunFam Spermidine hydroxycinnamoyl transferase 36 239 - -
Sebi141g00078 459 Pfam Transferase family 37 454 - -
Sebi141g00078 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 45 455 - -
Sebi141g00078 459 Gene3D - 241 459 IPR023213 -
Sebi141g00078 459 FunFam Tryptamine hydroxycinnamoyl transferase 243 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi141g00078 Sebi-Chr141 1653920 1660008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi141g00078 44 459 Monolignol Biosynthesis Gene Families AT5G48930 37.037 1.21e-92 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi141g00078 K15400 - gmx:100794490 756.903