Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi141g00077 ATGGAGGTTGTAAAGGGAAAATGGAGGAAAAATGTGATTTCGAAGGCGTGGGAGCGTTGGCGATCTTCGTTAGGAGGTGGTACTGGCAATAAGTGGTCACAATTGAAAGGTACTAATTCAGAAAATGATTATTATGATGAGAATGAGAAGGGTCGTCAAATAGCACCTCATGGTTGCTTTTCTGTATATGTGGGACCCCAGAAACAAAGGTTTGTTGTGAAGATGGAGTTTGTTAACCACCCACTATTCCAGACACTGCTAGATGAAGCAGAATTAGAGTATGGGTTTACAAGTGATGGCCCTATTTGTCTTCCCTGCAACGTTGATTTGTTCTATAAAGTGTTGGGTGAGATGGATCTCATTCCATGTACTCGTAGAAGCATTGCTGCTAAGGCCTTATCTTTTTTAGTTCTTCACAGCCCAGCTCGTCTTCTTTGTCATAAGCATAGGGGACGTCTTAGTGCATATAGTGTTATGGATTCAGAAATGCTGAAAATAAGCAGATTTGAATAG 513 0.4113 MEVVKGKWRKNVISKAWERWRSSLGGGTGNKWSQLKGTNSENDYYDENEKGRQIAPHGCFSVYVGPQKQRFVVKMEFVNHPLFQTLLDEAELEYGFTSDGPICLPCNVDLFYKVLGEMDLIPCTRRSIAAKALSFLVLHSPARLLCHKHRGRLSAYSVMDSEMLKISRFE 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi141g00077 170 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 114 IPR003676 GO:0009733
Sebi141g00077 170 Pfam Auxin responsive protein 32 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi141g00077 Sebi-Chr141 1620342 1620854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi141g00077 56 116 Calmodulin-binding Proteins AT4G34750 44.262 6.37e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi141g00077 K14488 - gmx:100793967 182.956